RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 ELMOD3Q96FG2 381 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 MARS2Q96GW9 593 aaKnown RBP14.1□□□□□ -0.15
NEK9-204ENST00000554258 ZNF75AQ96N20 296 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 ZNF184Q99676 751 aaPredicted RBP14.1□□□□□ -0.15
NEK9-204ENST00000554258 SH3GL3Q99963 347 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 OCSTAMPQ9BR26 566 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 ANKRD60Q9BZ19 345 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 H2AFY2Q9P0M6 372 aaPredicted RBP14.1□□□□□ -0.15
NEK9-204ENST00000554258 OR5V1Q9UGF6 321 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 TANC2Q9HCD6 1990 aa14.1□□□□□ -0.15
NEK9-204ENST00000554258 K7EIL1 84 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 MELTFP08582 738 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 MYF6P23409 242 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 GSTT1P30711 240 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 TSTQ16762 297 aaKnown RBP14.09□□□□□ -0.15
NEK9-204ENST00000554258 KLHL12Q53G59 568 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 LAIR2Q6ISS4 152 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 LYPD4Q6UWN0 246 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 THAP5Q7Z6K1 395 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 C8orf59Q8N0T1 100 aaPredicted RBP14.09□□□□□ -0.15
NEK9-204ENST00000554258 RFKQ969G6 155 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 OTULINQ96BN8 352 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 FAM71F1Q96KD3 344 aaPredicted RBP14.09□□□□□ -0.15
NEK9-204ENST00000554258 Q96MT0 163 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 DIRC2Q96SL1 478 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 EMC7Q9NPA0 242 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 DNAJC27Q9NZQ0 273 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 AASSQ9UDR5 926 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 WARS2Q9UGM6 360 aaKnown RBP14.09□□□□□ -0.15
NEK9-204ENST00000554258 CYB5R1Q9UHQ9 305 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 PCDHGB5Q9Y5G0 923 aa14.09□□□□□ -0.15
NEK9-204ENST00000554258 TVP23AA6NH52 213 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 C12orf71A8MTZ7 269 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 DENRO43583 198 aaKnown RBP14.08□□□□□ -0.16
NEK9-204ENST00000554258 UBL3O95164 117 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 CLPTM1O96005 669 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 SEC61A1P61619 476 aaKnown RBP14.08□□□□□ -0.16
NEK9-204ENST00000554258 IL5RAQ01344 420 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 SLC3A1Q07837 685 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 CDK5R2Q13319 367 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 MEP1BQ16820 701 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 LCN1P1Q5VSP4 162 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 FOXB2Q5VYV0 432 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 SLC16A14Q7RTX9 510 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 OR6K6Q8NGW6 343 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 SSMEM1Q8WWF3 244 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 WDR76Q9H967 626 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 MRPS18AQ9NVS2 196 aaKnown RBP14.08□□□□□ -0.16
NEK9-204ENST00000554258 CLN6Q9NWW5 311 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 LHFPL6Q9Y693 200 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 COMMD3-BMI1R4GMX3 469 aa14.08□□□□□ -0.16
NEK9-204ENST00000554258 GPR37O15354 613 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 HLA-HP01893 362 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 PATE4P0C8F1 98 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 PSKH1P11801 424 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 CD79AP11912 226 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 ZNF823P16415 610 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 SLC6A9P48067 706 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 ENTPD1P49961 510 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 KLF3P57682 345 aaPredicted RBP14.07□□□□□ -0.16
NEK9-204ENST00000554258 PCBD1P61457 104 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 GSG1Q2KHT4 349 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 SLC36A2Q495M3 483 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 RGS7BPQ6MZT1 257 aaPredicted RBP14.07□□□□□ -0.16
NEK9-204ENST00000554258 Q6ZTK2 550 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 C1orf174Q8IYL3 243 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 LRRC18Q8N456 261 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 KLHL36Q8N4N3 616 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 ZSCAN4Q8NAM6 433 aaPredicted RBP14.07□□□□□ -0.16
NEK9-204ENST00000554258 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.07□□□□□ -0.16
NEK9-204ENST00000554258 TIMM10BQ9Y5J6 103 aa14.07□□□□□ -0.16
NEK9-204ENST00000554258 PCLOQ9Y6V0 5065 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 A8MXK9 166 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 J3QRE1 110 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 ZNF593O00488 134 aaPredicted RBP14.06□□□□□ -0.16
NEK9-204ENST00000554258 HLA-DQA2P01906 255 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 SBK2P0C263 348 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 ZNF14P17017 642 aaPredicted RBP14.06□□□□□ -0.16
NEK9-204ENST00000554258 ZNF32P17041 273 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 RAB1AP62820 205 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 PSG4Q00888 419 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 EGR3Q06889 387 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 AQP6Q13520 282 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 KLHL22Q53GT1 634 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 OTPQ5XKR4 325 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 SLC18B1Q6NT16 456 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 BTNL3Q6UXE8 466 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 Q6ZSV7 163 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 SHFQ7M4L6 423 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 CNIH3Q8TBE1 160 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 TBC1D15Q8TC07 691 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 INTS14Q96SY0 518 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 YIPF3Q9GZM5 350 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 WNT5BQ9H1J7 359 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 KCNN2Q9H2S1 579 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 C16orf95Q9H693 158 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 ADGRL4Q9HBW9 690 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 PLCXD1Q9NUJ7 323 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 SLCO1C1Q9NYB5 712 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 EXOGQ9Y2C4 368 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms