RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ZNF101Q8IZC7 436 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 MUC15Q8N387 334 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 FTMTQ8N4E7 242 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF676Q8N7Q3 588 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 OR52N1Q8NH53 320 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 SLC25A40Q8TBP6 338 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 SPRYD4Q8WW59 207 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-218ENST00000552839 MSI2Q96DH6 328 aaKnown RBP9.74□□□□□ -0.85
TMEM116-218ENST00000552839 REEP6Q96HR9 211 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 SYT3Q9BQG1 590 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 C1QTNF5Q9BXJ0 243 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 OR2J1Q9GZK6 312 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 PBOV1Q9GZY1 135 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 RGCCQ9H4X1 137 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF442Q9H7R0 627 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 PLEKHA1Q9HB21 404 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 TUBG2Q9NRH3 451 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 ERVK-18Q9QC07 812 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 OR52A1Q9UKL2 312 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 LRRC42Q9Y546 428 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 PCDHGB5Q9Y5G0 923 aa9.74□□□□□ -0.85
TMEM116-218ENST00000552839 TMEM129A0AVI4 362 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 ACOD1A6NK06 481 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 VWC2LB2RUY7 222 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 H3BSA7 217 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 J3QRE1 110 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 MTRF1O75570 445 aaKnown RBP9.73□□□□□ -0.85
TMEM116-218ENST00000552839 NGFP01138 241 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 OR4A8P0C604 315 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 UBCP0CG48 685 aaKnown RBP9.73□□□□□ -0.85
TMEM116-218ENST00000552839 HSMCR30P0CW71 290 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 C21orf33P30042 268 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-218ENST00000552839 OTX1P32242 354 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-218ENST00000552839 SERPINF1P36955 418 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 EFNA4P52798 201 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 ERVS71-1P61550 626 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 SLC35A2P78381 396 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 HGFACQ04756 655 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 MFGE8Q08431 387 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-218ENST00000552839 KCTD21Q4G0X4 260 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 OR2G6Q5TZ20 316 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 PRSS48Q7RTY5 328 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 KLBQ86Z14 1044 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 OR2AE1Q8NHA4 323 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 GATAD2BQ8WXI9 593 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 C1orf159Q96HA4 380 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 NUFIP1Q9UHK0 495 aaKnown RBP9.73□□□□□ -0.85
TMEM116-218ENST00000552839 ZNF391Q9UJN7 358 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 STARD10Q9Y365 291 aa9.73□□□□□ -0.85
TMEM116-218ENST00000552839 PNMA8CA0A1B0GUJ8 204 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 PRR32B1ATL7 298 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 B9A039 149 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 TPD52L2O43399 206 aaKnown RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 SPRY1O43609 319 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 MRPS14O60783 128 aaKnown RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 CSF3P09919 207 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 OCM2P0CE71 109 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 OCMP0CE72 109 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 LIMS3P0CW19 117 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 LIMS4P0CW20 117 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 HNF1AP20823 631 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 GNALP38405 381 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 MMP16P51512 607 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 SNAI3Q3KNW1 292 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 GLYATL3Q5SZD4 288 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 OR8B12Q8NGG6 310 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 KLF14Q8TD94 323 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 TSEN15Q8WW01 171 aaKnown RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 MRPL24Q96A35 216 aaKnown RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 PELI1Q96FA3 418 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 FAM71F1Q96KD3 344 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 SIGLEC11Q96RL6 698 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 CDCA4Q9BXL8 241 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 DUSP21Q9H596 190 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 ISG20L2Q9H9L3 353 aaKnown RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 FKBP14Q9NWM8 211 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 FAM206AQ9NX38 181 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 CLEC2DQ9UHP7 191 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 FBXO9Q9UK97 447 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-218ENST00000552839 PMF1-BGLAPU3KQ54 211 aa9.72□□□□□ -0.85
TMEM116-218ENST00000552839 A0A087WXM4 84 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 TRBV2A0A0J9YWF9 115 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 ANKRD30BLA7E2S9 258 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 H3BSH0 61 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 M0R233 179 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 P2RY10O00398 339 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 SYT7O43581 403 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 ICMTO60725 284 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 RPSAP08865 295 aaKnown RBP9.71□□□□□ -0.86
TMEM116-218ENST00000552839 RAC2P15153 192 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 ZNF12P17014 697 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 ZNF20P17024 532 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 CFPP27918 469 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 MVKQ03426 396 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 ALKBH1Q13686 389 aaKnown RBP9.71□□□□□ -0.86
TMEM116-218ENST00000552839 HLXQ14774 488 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-218ENST00000552839 ALKBH6Q3KRA9 238 aa9.71□□□□□ -0.86
TMEM116-218ENST00000552839 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms