RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 XAF1Q6GPH4 301 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 RPL22L1Q6P5R6 122 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 RDH10Q8IZV5 341 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 FTMTQ8N4E7 242 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 ZNF676Q8N7Q3 588 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CSNK2A3Q8NEV1 391 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 SEMA6DQ8NFY4 1073 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 OR2Z1Q8NG97 314 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 OR13G1Q8NGZ3 307 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 ZDHHC8Q9ULC8 765 aa12.35□□□□□ -0.43
TNFRSF1A-216ENST00000543995 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 LOC107986453A0A1B0GWG9 222 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 TMEM212A6NML5 194 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 LALBAP00709 142 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CA6P23280 308 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 PTH2RP49190 550 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CHN2P52757 468 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 ATP5J2P56134 94 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 TAS2R43P59537 309 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 IRF3Q14653 427 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 CDK5R1Q15078 307 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 TSTQ16762 297 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 Q6ZR03 302 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 DOK3Q7L591 496 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 ZNF485Q8NCK3 441 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 OR5AK2Q8NH90 309 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 SORCS2Q96PQ0 1159 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 PDCD1LG2Q9BQ51 273 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 SLC30A2Q9BRI3 323 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 PAPOLGQ9BWT3 736 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 PLEKHA1Q9HB21 404 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 DECR2Q9NUI1 292 aa12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 MRPL15Q9P015 296 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-216ENST00000543995 A0A1B0GTI1 187 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MRPS14O60783 128 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NDUFS7O75251 213 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZFPL1O95159 310 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 IGHV1-46P01743 117 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 HLA-DPB1P04440 258 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ATP6V1B1P15313 513 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF12P17014 697 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TNFSF4P23510 183 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ACKR3P25106 362 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GNALP38405 381 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MAGEB1P43366 347 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MAP2K4P45985 399 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CCL8P80075 99 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RIPPLY1Q0D2K3 151 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SPHARQ15513 63 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PCGF3Q3KNV8 242 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZFP41Q8N8Y5 198 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR10AD1Q8NGE0 317 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MBD6Q96DN6 1003 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ELMOD3Q96FG2 381 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR5M11Q96RB7 305 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 DIRC2Q96SL1 478 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GSX2Q9BZM3 304 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SLC22A4Q9H015 551 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 HHLA2Q9UM44 414 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PIGLQ9Y2B2 252 aa12.33□□□□□ -0.44
TNFRSF1A-216ENST00000543995 LOC390937A0A1W2PQ73 354 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 H0YL77 283 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TNFAIP8O95379 198 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ISG15P05161 165 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 HSMCR30P0CW71 290 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 FAHP16930 419 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CCL1P22362 96 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CDH15P55291 814 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TNK1Q13470 666 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR8G1Q15617 311 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PLPP7Q8NBV4 271 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CCDC54Q8NEL0 328 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PIGCQ92535 297 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ITFG2Q969R8 447 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ENPP5Q9UJA9 477 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 LSM2Q9Y333 95 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NOP16Q9Y3C1 178 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RHBDD3Q9Y3P4 386 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 SIRT4Q9Y6E7 314 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 V9GYS6 101 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CENPEQ02224 2701 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 UNC79Q9P2D8 2635 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 USF3Q68DE3 2245 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF816-ZNF321PA0A0X1KG74 233 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 OGG1O15527 345 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MLNRO43193 412 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RPSAP08865 295 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PAX1P15863 534 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CELP19835 753 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ACHEP22303 614 aa12.32□□□□□ -0.44
TNFRSF1A-216ENST00000543995 EFNA4P52798 201 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms