RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 YIPF6Q96EC8 236 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 RAB40CQ96S21 281 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 TINAGL1Q9GZM7 467 aaPredicted RBP12.79□□□□□ -0.36
TRPM1-203ENST00000542188 ZNF552Q9H707 407 aaPredicted RBP12.79□□□□□ -0.36
TRPM1-203ENST00000542188 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 FOXJ3Q9UPW0 622 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 FZD9O00144 591 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 TMEFF1Q8IYR6 380 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 DND1Q8IYX4 353 aaKnown RBP12.79□□□□□ -0.36
TRPM1-203ENST00000542188 ARRDC1Q8N5I2 433 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 AKIP1Q9NQ31 210 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 TRAPPC4Q9Y296 219 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 SPEF2Q9C093 1822 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 G3V3Y1 287 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 M0R082 166 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 ALOX12BO75342 701 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 RHBDL1O75783 438 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 TMEM64Q6YI46 380 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 PAAF1Q9BRP4 392 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 PECRQ9BY49 303 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 DUSP21Q9H596 190 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 MANBALQ9NQG1 85 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
TRPM1-203ENST00000542188 ZAR1LA6NP61 321 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 HLA-DRB3P79483 266 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRPM1-203ENST00000542188 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 OR52B4Q8NGK2 314 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 SMIM4Q8WVI0 70 aa12.79□□□□□ -0.36
TRPM1-203ENST00000542188 MRC1P22897 1456 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 TMEM218A2RU14 115 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 MAP1LC3B2A6NCE7 125 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ARRDC5A6NEK1 342 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 RHOBP62745 196 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 OR2W3Q7Z3T1 314 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 MAP1LC3BQ9GZQ8 125 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 CD207Q9UJ71 328 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 TMED3Q9Y3Q3 217 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 NUMBLQ9Y6R0 609 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 MASP2O00187 686 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SP1P08047 785 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 HIST1H1CP16403 213 aaKnown RBP12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SHBQ15464 509 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SMIM21Q3B7S5 101 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ACSM6Q6P461 480 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 PLPP6Q8IY26 295 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ZC3HAV1LQ96H79 300 aaKnown RBP12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ANGPTL4Q9BY76 406 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 AUNIPQ9H7T9 357 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SLC7A10Q9NS82 523 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 MMP24Q9Y5R2 645 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 FGF2P09038 288 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 POU2F2P09086 479 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SLC6A12P48065 614 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 CDK5R1Q15078 307 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SLC16A13Q7RTY0 426 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 RBM45Q8IUH3 476 aaKnown RBP12.78□□□□□ -0.36
TRPM1-203ENST00000542188 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ZPBPQ9BS86 351 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ACER3Q9NUN7 267 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 CYBAP13498 195 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 CEBPBP17676 345 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 CXCL12P48061 93 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 LAT2Q9GZY6 243 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 TMEM131LA2VDJ0 1609 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 TRGV10A0A0A0MS01 117 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ZC3H12DA2A288 527 aaKnown RBP12.78□□□□□ -0.36
TRPM1-203ENST00000542188 CD96P40200 585 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 JAG1P78504 1218 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SSX1Q16384 188 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 ASTLQ6HA08 431 aaPredicted RBP12.78□□□□□ -0.36
TRPM1-203ENST00000542188 SLC35E4Q6ICL7 350 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 LINC00696Q6ZRV3 163 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 C6orf201Q7Z4U5 140 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 NKAIN4Q8IVV8 208 aa12.78□□□□□ -0.36
TRPM1-203ENST00000542188 C5orf49A4QMS7 147 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 LIM2P55344 173 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.36
TRPM1-203ENST00000542188 FABP5Q01469 135 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 TMEM267Q0VDI3 215 aaPredicted RBP12.77□□□□□ -0.36
TRPM1-203ENST00000542188 ZNF141Q15928 474 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 ARIH2OSQ8N7S6 290 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 H3BNC9 293 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 CYR61O00622 381 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 TMPRSS11DO60235 418 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 THBS4P35443 961 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 FUT6P51993 359 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 ADIPOQQ15848 244 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 ABHD17CQ6PCB6 329 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 FKBP11Q9NYL4 201 aa12.77□□□□□ -0.36
TRPM1-203ENST00000542188 TLCD2A6NGC4 264 aa12.77□□□□□ -0.37
TRPM1-203ENST00000542188 B4DEV8 164 aa12.77□□□□□ -0.37
TRPM1-203ENST00000542188 ATF1P18846 271 aa12.77□□□□□ -0.37
TRPM1-203ENST00000542188 DCTDP32321 178 aa12.77□□□□□ -0.37
TRPM1-203ENST00000542188 CLDN23Q96B33 292 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms