RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 NMNAT2Q9BZQ4 307 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 TRIM15Q9C019 465 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 ACOXLQ9NUZ1 547 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 ARL8BQ9NVJ2 186 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 TAGLN3Q9UI15 199 aa11.68□□□□□ -0.54
SNHG1-213ENST00000540725 IGHV3OR15-7A0A075B7D8 119 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 DHRS12A0PJE2 317 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ANKRD30BLA7E2S9 258 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ZNF593O00488 134 aaPredicted RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 TBX1O43435 398 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 CCNB2O95067 398 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ECDO95905 644 aaPredicted RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 LHBP01229 141 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 GASTP01350 101 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 SLC25A1P53007 311 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ARF6P62330 175 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 C11orf91Q3C1V1 193 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 PDLIM3Q53GG5 364 aaPredicted RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 TEX30Q5JUR7 227 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 TEX36Q5VZQ5 186 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 C16orf89Q6UX73 402 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 CYP2R1Q6VVX0 501 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 CPLX4Q7Z7G2 160 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 DEFB107AQ8IZN7 70 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 OR4Q3Q8NH05 313 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 OR8S1Q8NH09 359 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ST8SIA4Q92187 359 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 PDP1Q9P0J1 537 aaPredicted RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 BAIAP2Q9UQB8 552 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 PRKDCP78527 4128 aaKnown RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 CLPSL1A2RUU4 121 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 SOX14O95416 240 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ANXA2P07355 339 aaKnown RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 CLUP10909 449 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 GRK5P34947 590 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 MAGEA2P43356 314 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 SLC15A1P46059 708 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 CX3CR1P49238 355 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 RPL15P61313 204 aaKnown RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 GRB2P62993 217 aaKnown RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 FAM3AP98173 230 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 PPP1R8Q12972 351 aaKnown RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 TIGD6Q17RP2 521 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 SPATS1Q496A3 300 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 MIDNQ504T8 468 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 BRICD5Q6PL45 260 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 WDR86Q86TI4 376 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 C11orf53Q8IXP5 236 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 AQP11Q8NBQ7 271 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 SCCPDHQ8NBX0 429 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 OR2T33Q8NG76 320 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 LRRC29Q8WV35 223 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 DYRK2Q92630 601 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 RNPEPL1Q9HAU8 725 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 ARMC1Q9NVT9 282 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 NDE1Q9NXR1 346 aa11.67□□□□□ -0.54
SNHG1-213ENST00000540725 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
SNHG1-213ENST00000540725 A0A0U1RQK1 487 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 A0A1B0GW55 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 GPR137BO60478 399 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 IGHV4-59P01825 116 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L2P0CJ85 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L3P0CJ86 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L4P0CJ87 422 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L5P0CJ88 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L6P0CJ89 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L7P0CJ90 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
SNHG1-213ENST00000540725 HSD11B1P28845 292 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 BLVRAP53004 296 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 CSNK2BP67870 215 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 ELF3P78545 371 aaPredicted RBP11.66□□□□□ -0.54
SNHG1-213ENST00000540725 MXRA7P84157 204 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 EIF2B1Q14232 305 aaKnown RBP11.66□□□□□ -0.54
SNHG1-213ENST00000540725 MICBQ29980 383 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 WDR38Q5JTN6 314 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 LINC01590Q5TEZ4 76 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4L9Q6RFH8 374 aaPredicted RBP11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DPY19L4Q7Z388 723 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 FGFRL1Q8N441 504 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 OR1M1Q8NGA1 313 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 SGK3Q96BR1 496 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 REEP6Q96HR9 211 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 CCL13Q99616 98 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 CITED1Q99966 193 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 TOR3AQ9H497 397 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 VNN3Q9NY84 501 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 ACTR3BQ9P1U1 418 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 DUX4Q9UBX2 424 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 KPTNQ9Y664 436 aa11.66□□□□□ -0.54
SNHG1-213ENST00000540725 hCG_38984A0A1B0GV85 526 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 RIIAD1A6NNX1 92 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms