RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 KAT8Q9H7Z6 458 aaKnown RBP7.39□□□□□ -1.23
USP28-205ENST00000537706 GORASP2Q9H8Y8 452 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 SMURF2Q9HAU4 748 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 KAAG1Q9UBP8 84 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 TCF19Q9Y242 345 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 ZNF256Q9Y2P7 627 aaPredicted RBP7.39□□□□□ -1.23
USP28-205ENST00000537706 LYSTQ99698 3801 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 A0A0G2JPF8 293 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 NUDT19A8MXV4 375 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 HNRNPCL2B2RXH8 293 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 HNRNPCL3B7ZW38 293 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 GSTA4O15217 222 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 TNFAIP8O95379 198 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 ZCCHC18P0CG32 403 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 HNRNPCL4P0DMR1 293 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 RAP2AP10114 183 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 DAP3P51398 398 aaKnown RBP7.39□□□□□ -1.23
USP28-205ENST00000537706 SCRN3Q0VDG4 424 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 HIST3H3Q16695 136 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 GTDC1Q4AE62 458 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
USP28-205ENST00000537706 LRRC10Q5BKY1 277 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 FBXW12Q6X9E4 464 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 SYT9Q86SS6 491 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 OR52H1Q8NGJ2 320 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 OR10A6Q8NH74 314 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 CAPSLQ8WWF8 208 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 H1FXQ92522 213 aaKnown RBP7.39□□□□□ -1.23
USP28-205ENST00000537706 TMEM43Q9BTV4 400 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 HCAR1Q9BXC0 346 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 ANKRD60Q9BZ19 345 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 FAM192AQ9GZU8 254 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 PTTG3PQ9NZH4 202 aa7.39□□□□□ -1.23
USP28-205ENST00000537706 A0A1W2PQ09 198 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 SAC3D1A6NKF1 404 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 IQCF6A8MYZ5 107 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 SOCS2O14508 198 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 RFXANKO14593 260 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 MLNRO43193 412 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 TPST1O60507 370 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 GZMMP51124 257 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 LRRC74AQ0VAA2 488 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 CLEC12AQ5QGZ9 265 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 FKBP9P1Q75LS8 142 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 KRT77Q7Z794 578 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 CBR4Q8N4T8 237 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 TNFRSF14Q92956 283 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 NABP1Q96AH0 204 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 CNBD2Q96M20 576 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 SLC29A1Q99808 456 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 THUMPD1Q9NXG2 353 aaKnown RBP7.38□□□□□ -1.23
USP28-205ENST00000537706 OAZ3Q9UMX2 235 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 CHST2Q9Y4C5 530 aa7.38□□□□□ -1.23
USP28-205ENST00000537706 H0YAE9 185 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 CXCR6O00574 342 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 DOK2O60496 412 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 TRMUO75648 421 aaKnown RBP7.37□□□□□ -1.23
USP28-205ENST00000537706 BCHEP06276 602 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 SMIM18P0DKX4 95 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 POU1F1P28069 291 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 LAP3P28838 519 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 CDKN2CP42773 168 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 ZNF133P52736 654 aaPredicted RBP7.37□□□□□ -1.23
USP28-205ENST00000537706 RAB25P57735 213 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 CD47Q08722 323 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 MZT1Q08AG7 82 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 PRAMEF6Q5VXH4 476 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 Q8N7P7 452 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 PLPP7Q8NBV4 271 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 BHLHE23Q8NDY6 225 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 SLC22A4Q9H015 551 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 MAGIXQ9H6Y5 334 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 HEXA-AS1Q9H8Q6 139 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 EDA2RQ9HAV5 297 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 BTNL2Q9UIR0 455 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 GMEB1Q9Y692 573 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 A6NDX4 124 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 EVPLLA8MZ36 301 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 SLC2A10O95528 541 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 OR8G1Q15617 311 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 MICBQ29980 383 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 TMEM95Q3KNT9 176 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 ERICH5Q6P6B1 374 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 ETV3LQ6ZN32 361 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 ZNF621Q6ZSS3 439 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 FNDC8Q8TC99 324 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 C17orf50Q8WW18 174 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 ACOT11Q8WXI4 607 aaPredicted RBP7.37□□□□□ -1.23
USP28-205ENST00000537706 FAM162AQ96A26 154 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 FOXRED1Q96CU9 486 aaPredicted RBP7.37□□□□□ -1.23
USP28-205ENST00000537706 RBP7Q96R05 134 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 PANX1Q96RD7 426 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 SEPHS2Q99611 448 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 ADI1Q9BV57 179 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 MRPL13Q9BYD1 178 aaKnown RBP7.37□□□□□ -1.23
USP28-205ENST00000537706 MRPS26Q9BYN8 205 aaKnown RBP7.37□□□□□ -1.23
USP28-205ENST00000537706 TAS2R5Q9NYW4 299 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 SLC13A4Q9UKG4 626 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 CORO2BQ9UQ03 480 aa7.37□□□□□ -1.23
USP28-205ENST00000537706 V9GYQ6 96 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms