RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IQCF1Q8N6M8 205 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 CCDC197Q8NCU1 140 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 OR6N2Q8NGY6 317 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 OR8S1Q8NH09 359 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TEX47Q8TBZ9 253 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 CCDC124Q96CT7 223 aaKnown RBP7.41□□□□□ -1.22
COPB1-211ENST00000534234 ASB9Q96DX5 294 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 CLPTM1LQ96KA5 538 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 INTS14Q96SY0 518 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 ABHD6Q9BV23 337 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 ZNF747Q9BV97 191 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TOR3AQ9H497 397 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 SP140LQ9H930 580 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TRIM36Q9NQ86 728 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 TAS2R1Q9NYW7 299 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 CTSZQ9UBR2 303 aa7.41□□□□□ -1.22
COPB1-211ENST00000534234 PRPF19Q9UMS4 504 aaKnown RBP7.41□□□□□ -1.22
COPB1-211ENST00000534234 ANK2Q01484 3957 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 hCG_1807616A0A1W2PRN6 198 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 GNGT2O14610 69 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 GLCEO94923 617 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 FAM107AO95990 144 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 LHBP01229 141 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 GYPAP02724 150 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 POU1F1P28069 291 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 GRK5P34947 590 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 BPIFB3P59826 476 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 POU4F2Q12837 409 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 GK3PQ14409 553 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 DEFB112Q30KQ8 113 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 GPR157Q5UAW9 335 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 C16orf87Q6PH81 154 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 FAM57BQ71RH2 274 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 RHOUQ7L0Q8 258 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 SHFQ7M4L6 423 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.4□□□□□ -1.22
COPB1-211ENST00000534234 GCSAMQ8N6F7 178 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 OR52H1Q8NGJ2 320 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 RNF133Q8WVZ7 376 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 REEP6Q96HR9 211 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 PCGF1Q9BSM1 259 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 C1orf21Q9H246 121 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 OR51V1Q9H2C8 321 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 MARCH7Q9H992 704 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 DNAJC27Q9NZQ0 273 aa7.4□□□□□ -1.22
COPB1-211ENST00000534234 MDFIC2A0A1B0GVS7 189 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 ZNF879B4DU55 563 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 ACOT8O14734 319 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 TMPRSS2O15393 492 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 HOXA3O43365 443 aaPredicted RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 TOX4O94842 621 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 SFTPBP07988 381 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 H2BFMP0C1H6 154 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 PAICSP22234 425 aaKnown RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 CFL1P23528 166 aaKnown RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 OPRL1P41146 370 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 GSK3AP49840 483 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 ZNF121P58317 390 aaPredicted RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 IL13RA1P78552 427 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 GINS1Q14691 196 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 GFOD2Q3B7J2 385 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 PRSS45Q7RTY3 260 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 TMEM179BQ7Z7N9 219 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 FAM90A1Q86YD7 464 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 C11orf53Q8IXP5 236 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 TIGD4Q8IY51 512 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 ADGRG5Q8IZF4 528 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 PNLDC1Q8NA58 520 aaKnown RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 THEM6Q8WUY1 208 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 CANT1Q8WVQ1 401 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 TAF15Q92804 592 aaKnown RBP eCLIP7.39□□□□□ -1.23
COPB1-211ENST00000534234 RNF166Q96A37 237 aaPredicted RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 AMELYQ99218 206 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 THTPAQ9BU02 230 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 OR10A2Q9H208 303 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 PRDM13Q9H4Q3 707 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 RNPEPL1Q9HAU8 725 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 SMURF1Q9HCE7 757 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 PDP1Q9P0J1 537 aaPredicted RBP7.39□□□□□ -1.23
COPB1-211ENST00000534234 KIF17Q9P2E2 1029 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 ZNF319Q9P2F9 582 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 RHBDD3Q9Y3P4 386 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 TANC2Q9HCD6 1990 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 WNK2Q9Y3S1 2297 aa7.39□□□□□ -1.23
COPB1-211ENST00000534234 IGHV3OR15-7A0A075B7D8 119 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 CENPVL3A0A0U1RRI6 287 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 hCG_38984A0A1B0GV85 526 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 ARRDC5A6NEK1 342 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 AQP12BA6NM10 295 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 POM121CA8CG34 1229 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 PRR23D1E9PI22 279 aaPredicted RBP7.38□□□□□ -1.23
COPB1-211ENST00000534234 P2RY10O00398 339 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 DVL1O14640 695 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 GPR37O15354 613 aa7.38□□□□□ -1.23
COPB1-211ENST00000534234 ECDO95905 644 aaPredicted RBP7.38□□□□□ -1.23
COPB1-211ENST00000534234 HMGN1P05114 100 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms