RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MZT1Q08AG7 82 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 GFOD2Q3B7J2 385 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 KDM4DQ6B0I6 523 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 NANPQ8TBE9 248 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 YIPF3Q9GZM5 350 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 RNF7Q9UBF6 113 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 CCDC182A6NF36 153 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 PRKYO43930 277 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 EPHA1P21709 976 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 LCN1P1Q5VSP4 162 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 LRRN1Q6UXK5 716 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 RGCCQ9H4X1 137 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 NIPAL2Q9H841 368 aa25.35■■□□□ 1.65
SSSCA1-207ENST00000533115 ZNF12P17014 697 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 GSK3AP49840 483 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 HCCSP53701 268 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 SLX4IPQ5VYV7 408 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 ASRGL1Q7L266 308 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 DEFB108BQ8NET1 73 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 NEIL1Q96FI4 390 aaPredicted RBP25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 C19orf24Q9BVV8 132 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 SSBP3Q9BWW4 388 aaPredicted RBP25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 C14orf119Q9NWQ9 140 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 OR5V1Q9UGF6 321 aa25.34■■□□□ 1.65
SSSCA1-207ENST00000533115 A0A0A6YYJ9 748 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 ZAR1LA6NP61 321 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 GRPP07492 148 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 MRPL3P09001 348 aaKnown RBP25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 EPHA2P29317 976 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 ZNF154Q13106 437 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 KRT77Q7Z794 578 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 OR8S1Q8NH09 359 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 C1orf123Q9NWV4 160 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 ENOPH1Q9UHY7 261 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 LRP12Q9Y561 859 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 INSIG2Q9Y5U4 225 aa25.33■■□□□ 1.65
SSSCA1-207ENST00000533115 PSMA6P60900 246 aaKnown RBP25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 GNB2P62879 340 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 C12orf73Q69YU5 71 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 DCDC5Q6ZRR9 648 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 NLRC3Q7RTR2 1065 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 C19orf18Q8NEA5 215 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 CSNK2A3Q8NEV1 391 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 OR8B3Q8NGG8 313 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 OR8B2Q96RD0 313 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 SEMA6AQ9H2E6 1030 aa25.32■■□□□ 1.64
SSSCA1-207ENST00000533115 M0R129 80 aa25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 FSHBP01225 129 aa25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 EFNB1P98172 346 aa25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 HOXA4Q00056 320 aaPredicted RBP25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 KCTD18Q6PI47 426 aaPredicted RBP25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 BCDIN3DQ7Z5W3 292 aaKnown RBP25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 TCEANCQ8N8B7 351 aa25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 ZNF418Q8TF45 676 aaPredicted RBP25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 CENPNQ96H22 339 aaPredicted RBP25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 AUP1Q9Y679 476 aa25.31■■□□□ 1.64
SSSCA1-207ENST00000533115 OR8B8Q15620 311 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 SNCBQ16143 134 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 DEGS2Q6QHC5 323 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 LYPD2Q6UXB3 125 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 MEPCEQ7L2J0 689 aaKnown RBP25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 BOLLQ8N9W6 283 aaKnown RBP25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 OR8B12Q8NGG6 310 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 TMEM163Q8TC26 289 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 CIB1Q99828 191 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 H2AFY2Q9P0M6 372 aaPredicted RBP25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 RHBDD3Q9Y3P4 386 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 TMEM14AQ9Y6G1 99 aa25.3■■□□□ 1.64
SSSCA1-207ENST00000533115 A6NLC8 198 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 LGALS8O00214 317 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 VENTXO95231 258 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 GNALP38405 381 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 PITPNBP48739 271 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 PAX2Q02962 417 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 KCNJ8Q15842 424 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 AADACL4Q5VUY2 407 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 NXNL2Q5VZ03 156 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 ZNF826PQ6ZT77 177 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 FTMTQ8N4E7 242 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 CNN2Q99439 309 aaKnown RBP25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 MRI1Q9BV20 369 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 MROQ9BYG7 248 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 ZNF391Q9UJN7 358 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 OAZ3Q9UMX2 235 aa25.29■■□□□ 1.64
SSSCA1-207ENST00000533115 CD80P33681 288 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 SFRP4Q6FHJ7 346 aaPredicted RBP25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 CCDC121Q6ZUS5 278 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 WDR86Q86TI4 376 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 ASB17Q8WXJ9 295 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 LYZL4Q96KX0 146 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 PAPOLGQ9BWT3 736 aaKnown RBP25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 PPP1R3EQ9H7J1 279 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 CLN8Q9UBY8 286 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 COPS3Q9UNS2 423 aa25.28■■□□□ 1.64
SSSCA1-207ENST00000533115 ACOD1A6NK06 481 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 SLC22A31A6NKX4 558 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 C3orf80F5H4A9 247 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 PSMD9O00233 223 aa25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 RGS9O75916 674 aaPredicted RBP25.27■■□□□ 1.64
SSSCA1-207ENST00000533115 PSMB10P40306 273 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms