RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TANC2Q9HCD6 1990 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 LOC105371242A0A075B767 164 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 CEACAM18A8MTB9 384 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 SPRY1O43609 319 aaPredicted RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 ZNF254O75437 659 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 CIB2O75838 187 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 CYB5R3P00387 301 aaPredicted RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 LIPFP07098 398 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ZNF12P17014 697 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 FASP25445 335 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ZFP36P26651 326 aaKnown RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 DCTDP32321 178 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 GNALP38405 381 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 OPRL1P41146 370 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 NAA10P41227 235 aaPredicted RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 BPIFB3P59826 476 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 RPS7P62081 194 aaKnown RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 PAX8Q06710 450 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ZNF154Q13106 437 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 LCN1P1Q5VSP4 162 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 SLC16A9Q7RTY1 509 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 IQCF1Q8N6M8 205 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 RAB40AQ8WXH6 277 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ASB17Q8WXJ9 295 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ZMYND19Q96E35 227 aaPredicted RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 REEP6Q96HR9 211 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 PGAM5Q96HS1 289 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 MNTQ99583 582 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 TEAD3Q99594 435 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 TMEM246Q9BRR3 403 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ADAT1Q9BUB4 502 aaKnown RBP8.05□□□□□ -1.12
CHD7-208ENST00000528280 OSBPL10Q9BXB5 764 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 MED20Q9H944 212 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 DCAF16Q9NXF7 216 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 TVP23BQ9NYZ1 205 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 ERVK-18Q9QC07 812 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 LAMP5Q9UJQ1 280 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 NUP50Q9UKX7 468 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 AP4S1Q9Y587 144 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 INSIG2Q9Y5U4 225 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 MPC1Q9Y5U8 109 aa8.05□□□□□ -1.12
CHD7-208ENST00000528280 KIR2DS1A0A191URI9 304 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 ANXA2P2A6NMY6 339 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 TRAPPC2LH3BP13 241 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 LGALS8O00214 317 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 PHYHO14832 338 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 FAM20BO75063 409 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 AVPP01185 164 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 GRPP07492 148 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 SLC2A1P11166 492 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 PMELP40967 661 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 ZNF121P58317 390 aaPredicted RBP8.04□□□□□ -1.12
CHD7-208ENST00000528280 HILS1P60008 231 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 FAM3AP98173 230 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 IL5RAQ01344 420 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 DBPQ10586 325 aaPredicted RBP8.04□□□□□ -1.12
CHD7-208ENST00000528280 PTGES3Q15185 160 aaKnown RBP8.04□□□□□ -1.12
CHD7-208ENST00000528280 ATP6AP1Q15904 470 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 ARMCX4Q5H9R4 360 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 C1orf146Q5VVC0 180 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 FAHD1Q6P587 224 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 C1orf229Q6ZS94 237 aaPredicted RBP8.04□□□□□ -1.12
CHD7-208ENST00000528280 FAM57BQ71RH2 274 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 SPATC1Q76KD6 591 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 KRT77Q7Z794 578 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 GALNT4Q8N4A0 578 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 OR56B2PQ8NGI1 322 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 OR2AE1Q8NHA4 323 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 FAM216AQ8WUB2 273 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 STMN2Q93045 179 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 DUS3LQ96G46 650 aaKnown RBP8.04□□□□□ -1.12
CHD7-208ENST00000528280 HIST1H2AAQ96QV6 131 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 MICU1Q9BPX6 476 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 MROQ9BYG7 248 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 UFSP2Q9NUQ7 469 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 CLN8Q9UBY8 286 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 OPN4Q9UHM6 478 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 LRRC42Q9Y546 428 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
CHD7-208ENST00000528280 A6NLC8 198 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 ECDO95905 644 aaPredicted RBP8.03□□□□□ -1.12
CHD7-208ENST00000528280 ATP6V1B1P15313 513 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 MUC1P15941 1255 aaPredicted RBP8.03□□□□□ -1.12
CHD7-208ENST00000528280 ALOX5APP20292 161 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 CFHR2P36980 270 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 PSMB10P40306 273 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 MAP2K3P46734 347 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 MTNR1AP48039 350 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 PITPNBP48739 271 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 GSK3AP49840 483 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 DAPP51397 102 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 APOFQ13790 326 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 OR8B8Q15620 311 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 MPPED2Q15777 294 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 TMEM236Q5W0B7 351 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 PRSS45Q7RTY3 260 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 HS3ST5Q8IZT8 346 aa8.03□□□□□ -1.12
CHD7-208ENST00000528280 DEFB108BQ8NET1 73 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms