RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SOWAHCQ53LP3 525 aaPredicted RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 CXorf66Q5JRM2 361 aaPredicted RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 CLEC12AQ5QGZ9 265 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 EEF1A1P5Q5VTE0 462 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TMEM236Q5W0B7 351 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TTC23Q5W5X9 447 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 NSUN5P2Q63ZY6 315 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 RTL6Q6ICC9 239 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TMEM211Q6ICI0 200 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ACSM5Q6NUN0 579 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SLC27A4Q6P1M0 643 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CLEC2AQ6UVW9 174 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 PLXDC2Q6UX71 529 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CASP12Q6UXS9 341 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 NHLRC1Q6VVB1 395 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ZNF620Q6ZNG0 422 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SLC35D2Q76EJ3 337 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 AAED1Q7RTV5 226 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 PARP8Q8N3A8 854 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 LRRC75AQ8NAA5 344 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CSNK2A3Q8NEV1 391 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 OR2T33Q8NG76 320 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 OR9K2Q8NGE7 335 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 OR52L1Q8NGH7 329 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 FNDC9Q8TBE3 224 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 FANK1Q8TC84 345 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SECTM1Q8WVN6 248 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 GMPPAQ96IJ6 420 aaPredicted RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 RDH12Q96NR8 316 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ERMAPQ96PL5 475 aaPredicted RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 SLC38A2Q96QD8 506 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 GABARAPL3Q9BY60 117 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TXNIPQ9H3M7 391 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 RNF122Q9H9V4 155 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 FAM118AQ9NWS6 357 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SMPD3Q9NY59 655 aaPredicted RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 TVP23BQ9NYZ1 205 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 KLHL9Q9P2J3 617 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 IL20RAQ9UHF4 553 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 POU2F3Q9UKI9 436 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 NOSIPQ9Y314 301 aaKnown RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 ZNF175Q9Y473 711 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CDH10Q9Y6N8 788 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 MGAQ8IWI9 3026 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ZGRF1Q86YA3 2104 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 MED12Q93074 2177 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 IGKV3D-15A0A087WSY6 115 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 A0A1B0GUH1 482 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 A6NIZ1 184 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZSCAN5BA6NJL1 495 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZNF716A6NP11 495 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZNF724A8MTY0 619 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 DLGAP1O14490 977 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 BHLHE40O14503 412 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 VCYO14598 125 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 XKRYO14609 159 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 GPRIN2O60269 458 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 KRT33AO76009 404 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 TOXO94900 526 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 RENP00797 406 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 IFNGP01579 166 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 CRHP06850 196 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 STSP08842 583 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 EPHA2P29317 976 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 CEACAM8P31997 349 aaPredicted RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 CA7P43166 264 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 HSPA13P48723 471 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 BIDP55957 195 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 FXYD6P3P58550 94 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 CDC42P60953 191 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 RAP1BP61224 184 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 RPL27P61353 136 aaKnown RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 RAP1AP62834 184 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ADARB1P78563 741 aaKnown RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 ACKR1Q16570 336 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 PGGHGQ32M88 737 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 NIPAL3Q6P499 406 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 C3P1Q6ZMU1 363 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 Q6ZTC4 211 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 C9orf139Q6ZV77 190 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 HDDC2Q7Z4H3 204 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZNF100Q8IYN0 542 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ARIH2OSQ8N7S6 290 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZIC4Q8N9L1 334 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR2AK2Q8NG84 335 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR52E2Q8NGJ4 325 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR52M1Q8NGK5 317 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR8D4Q8NGM9 314 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR4Q3Q8NH05 313 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR4K13Q8NH42 304 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 OR6X1Q8NH79 312 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZNF671Q8TAW3 534 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 RNF128Q8TEB7 428 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ABHD3Q8WU67 409 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 TRUB1Q8WWH5 349 aaKnown RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 CYGBQ8WWM9 190 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ORAI1Q96D31 301 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 SLC25A44Q96H78 314 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms