RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ADARB1P78563 741 aaKnown RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 ACVR1Q04771 509 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 NAB1Q13506 487 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 LY6G6FQ5SQ64 297 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 C9orf135Q5VTT2 229 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 ZNF620Q6ZNG0 422 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 Q6ZR54 194 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 ZCCHC23Q6ZST2 131 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 ZNF720Q7Z2F6 126 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 PHF13Q86YI8 300 aaPredicted RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 KIR2DL5AQ8N109 375 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 ZNF557Q8N988 423 aaPredicted RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 OR4A4PQ8NGN8 299 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 KIR2DL5BQ8NHK3 375 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 GRPEL2Q8TAA5 225 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 RCN3Q96D15 328 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 LRRC39Q96DD0 335 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 CIB1Q99828 191 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 KCTD14Q9BQ13 255 aaPredicted RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 TNFRSF19Q9NS68 423 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 STMN3Q9NZ72 180 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 CD300AQ9UGN4 299 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 DNAH12Q6ZR08 3092 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 XIRP2A4UGR9 3374 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 LOC100653049A0A140TA62 436 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 C12orf77C9JDV5 145 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 BET1O15155 118 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 ZW10O43264 779 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 UPK1BO75841 260 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 PIAS1O75925 651 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 KRT34O76011 436 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 ERCC1P07992 297 aaPredicted RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 TRAPPC2P0DI81 140 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 TRAPPC2BP0DI82 140 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 GTF2E2P29084 291 aaKnown RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 FMO3P31513 532 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 MAGEA12P43365 314 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 RFX3P48380 749 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 TAS2R19P59542 299 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 GABARAPL2P60520 117 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 RAB10P61026 200 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 RPL10AP62906 217 aaKnown RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 RAD51Q06609 339 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 ZNF181Q2M3W8 571 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 YIF1BQ5BJH7 314 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 TFDP3Q5H9I0 405 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 BRMS1LQ5PSV4 323 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 LIN9Q5TKA1 542 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 STEAP4Q687X5 459 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 SSX9Q7RTT3 188 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 SLC16A14Q7RTX9 510 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 LINC00523Q86TU6 105 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 LHFPL3Q86UP9 236 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 PUSL1Q8N0Z8 303 aaKnown RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 ZFP90Q8TF47 636 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 NRGNQ92686 78 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 ANKRD9Q96BM1 317 aaPredicted RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 NRBF2Q96F24 287 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 RNF170Q96K19 258 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 TMEM246Q9BRR3 403 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 C9orf16Q9BUW7 83 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 RIOK2Q9BVS4 552 aaKnown RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 HES7Q9BYE0 225 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 OR51M1Q9H341 326 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 RANBP3Q9H6Z4 567 aaPredicted RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 SLC25A22Q9H936 323 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 AGPAT4Q9NRZ5 378 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 CALYQ9NYX4 217 aa5.34□□□□□ -1.55
LSM1-202ENST00000520286 LSM7Q9UK45 103 aaKnown RBP5.34□□□□□ -1.55
LSM1-202ENST00000520286 SIP14410 1827 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 H7C0C1 242 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 CCRL2O00421 344 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 NDUFA2O43678 99 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 CD1EP15812 388 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 RORAP35398 523 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 NPBWR2P48146 333 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
LSM1-202ENST00000520286 COPZ1P61923 177 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 PSMC5P62195 406 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 RBM48Q5RL73 367 aaKnown RBP5.33□□□□□ -1.56
LSM1-202ENST00000520286 N4BP2L1Q5TBK1 243 aaPredicted RBP5.33□□□□□ -1.56
LSM1-202ENST00000520286 DEFB128Q7Z7B8 93 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 CTAGE3PQ8IX95 158 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 GABRG1Q8N1C3 465 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 EID2Q8N6I1 236 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 SPATA3Q8NHX4 192 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 ACTL9Q8TC94 416 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 DYNC2LI1Q8TCX1 351 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 ARPC1AQ92747 370 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 DYNLL2Q96FJ2 89 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 C16orf74Q96GX8 76 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 B3GALT6Q96L58 329 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 OR52B2Q96RD2 323 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 RARRES2Q99969 163 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 OR51J1Q9H342 316 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 EFCAB1Q9HAE3 211 aa5.33□□□□□ -1.56
LSM1-202ENST00000520286 FGF20Q9NP95 211 aaPredicted RBP5.33□□□□□ -1.56
LSM1-202ENST00000520286 RPRD1BQ9NQG5 326 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms