RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 FAM57BQ71RH2 274 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 SIGLECL1Q8N7X8 197 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 BBS1Q8NFJ9 593 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 OR8B3Q8NGG8 313 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 OTOSQ8NHW6 89 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 UTP4Q969X6 686 aaKnown RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 REEP6Q96HR9 211 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 PLEKHA8Q96JA3 519 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 OR8B2Q96RD0 313 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 ZNF556Q9HAH1 456 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 C1orf123Q9NWV4 160 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 SOX21Q9Y651 276 aaPredicted RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 hCG_38984A0A1B0GV85 526 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 LGALS8O00214 317 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 APOC1P02654 83 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 GRPP07492 148 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 IGHV4-38-2P0DP08 117 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 BNIP1Q12981 228 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 TIGD6Q17RP2 521 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 ARMCX4Q5H9R4 360 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 C12orf54Q6X4T0 127 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 WDR86Q86TI4 376 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 GCSAMQ8N6F7 178 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 BOLLQ8N9W6 283 aaKnown RBP14.93□□□□□ -0.02
TPM3-220ENST00000509601 THEM6Q8WUY1 208 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 UPRTQ96BW1 309 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 NRBF2Q96F24 287 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 YY1AP1Q9H869 796 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 SP140LQ9H930 580 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 SLC25A19Q9HC21 320 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 DNAJC27Q9NZQ0 273 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 CTSZQ9UBR2 303 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 CLN8Q9UBY8 286 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 KLHDC2Q9Y2U9 406 aa14.93□□□□□ -0.02
TPM3-220ENST00000509601 ANKRD30BLA7E2S9 258 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 C3orf80F5H4A9 247 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 PRODHO43272 600 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 LYNP07948 512 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 H2BFMP0C1H6 154 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 CFPP27918 469 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 GSK3AP49840 483 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 DAPP51397 102 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 HCCSP53701 268 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 UBA52P62987 128 aaKnown RBP14.92□□□□□ -0.02
TPM3-220ENST00000509601 SLC35D3Q5M8T2 416 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 BTNL3Q6UXE8 466 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 DOK3Q7L591 496 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 NLRC3Q7RTR2 1065 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 ZNF454Q8N9F8 522 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 OR52H1Q8NGJ2 320 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 NUDT16L1Q9BRJ7 211 aaKnown RBP14.92□□□□□ -0.02
TPM3-220ENST00000509601 RASSF4Q9H2L5 321 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 BRD7Q9NPI1 651 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 C14orf119Q9NWQ9 140 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 RHBDD3Q9Y3P4 386 aa14.92□□□□□ -0.02
TPM3-220ENST00000509601 IGHV3OR16-10A0A075B7F0 116 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 C22orf46C9J442 243 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 PHYHO14832 338 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 FCN3O75636 299 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 TIPRLO75663 272 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 EGR1P18146 543 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 ALOX5APP20292 161 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 CRISP1P54107 249 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 FAHD1Q6P587 224 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 GCDHQ92947 438 aaPredicted RBP14.91□□□□□ -0.02
TPM3-220ENST00000509601 PGAM5Q96HS1 289 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 C1orf147Q96MC9 270 aaPredicted RBP14.91□□□□□ -0.02
TPM3-220ENST00000509601 OR10A2Q9H208 303 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 TVP23BQ9NYZ1 205 aa14.91□□□□□ -0.02
TPM3-220ENST00000509601 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.9□□□□□ -0.02
TPM3-220ENST00000509601 OOEPA6NGQ2 149 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 HAX1O00165 279 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 PLATP00750 562 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 NAA10P41227 235 aaPredicted RBP14.9□□□□□ -0.02
TPM3-220ENST00000509601 ACTG1P63261 375 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 MZT1Q08AG7 82 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 POU4F2Q12837 409 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 SNAPC1Q16533 368 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 C9orf139Q6ZV77 190 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.9□□□□□ -0.02
TPM3-220ENST00000509601 OR1M1Q8NGA1 313 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 LYZL4Q96KX0 146 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 TEAD3Q99594 435 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 RNPEPL1Q9HAU8 725 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 ERVK-18Q9QC07 812 aa14.9□□□□□ -0.02
TPM3-220ENST00000509601 TRAV38-1A0A0B4J264 116 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 CCDC182A6NF36 153 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 A6NLC8 198 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 ADAM20O43506 726 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 NDUFA2O43678 99 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 GYPAP02724 150 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 CFL1P23528 166 aaKnown RBP14.89□□□□□ -0.03
TPM3-220ENST00000509601 ACKR3P25106 362 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 NPY4RP50391 375 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 APOFQ13790 326 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 PTGES3Q15185 160 aaKnown RBP14.89□□□□□ -0.03
TPM3-220ENST00000509601 OR8B8Q15620 311 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 KCNJ8Q15842 424 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 GFOD2Q3B7J2 385 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms