RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CEACAM16Q2WEN9 425 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 LINC00303Q3SY05 128 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 GLIPR1L1Q6UWM5 242 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 SEZ6L2Q6UXD5 910 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 Q6ZTK2 550 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 CHMP1BQ7LBR1 199 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 BIVMQ86UB2 503 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF101Q8IZC7 436 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 PAQR4Q8N4S7 273 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 TMEM251Q8N6I4 163 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 SEMA6DQ8NFY4 1073 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 GCDHQ92947 438 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 GPER1Q99527 375 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 S100A13Q99584 98 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 GINS4Q9BRT9 223 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 TMEM59Q9BXS4 323 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 OR2H1Q9GZK4 316 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 IRF2BPLQ9H1B7 796 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 OR10A4Q9H209 315 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 PCDHB16Q9NRJ7 776 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 MRPL15Q9P015 296 aaKnown RBP8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF319Q9P2F9 582 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF222Q9UK12 451 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF175Q9Y473 711 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 PCSK5Q92824 1860 aa8.1□□□□□ -1.11
HTT-205ENST00000509043 ZNF587BE7ETH6 402 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 CDC14BO60729 498 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 CD3DP04234 171 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 GIPP09681 153 aaPredicted RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 SLC2A1P11166 492 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 ZNF32P17041 273 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 NAT1P18440 290 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 PTGFRP43088 359 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 MAGEA5P43359 124 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 RAP2BP61225 183 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 PPIAP62937 165 aaKnown RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 IFITM2Q01629 132 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 GK2Q14410 553 aaPredicted RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 KISS1Q15726 138 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 MPPED2Q15777 294 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 RNASE10Q5GAN6 216 aaKnown RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 TMEM255AQ5JRV8 349 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 FAHD2BQ6P2I3 314 aaPredicted RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 LINC00696Q6ZRV3 163 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 NAA40Q86UY6 237 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 MCEMP1Q8IX19 187 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 PIP4P2Q8N4L2 257 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 FAM89BQ8N5H3 189 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 OR11H7Q8NGC8 314 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 FAHD2AQ96GK7 314 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 LYZL4Q96KX0 146 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 BEX2Q9BXY8 128 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 PRRG4Q9BZD6 226 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 ZNF436Q9C0F3 470 aaPredicted RBP8.09□□□□□ -1.11
HTT-205ENST00000509043 PRDM14Q9GZV8 571 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 OPA3Q9H6K4 179 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 GLRX2Q9NS18 164 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 NKIRAS2Q9NYR9 191 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 ZNF224Q9NZL3 707 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 ANAPC10Q9UM13 185 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 PIGLQ9Y2B2 252 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 EML6Q6ZMW3 1958 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 KIAA1549Q9HCM3 1950 aa8.09□□□□□ -1.11
HTT-205ENST00000509043 ALPK2Q86TB3 2170 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 IGKV1-9A0A0C4DH69 117 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 FAM166BA8MTA8 275 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 SERPINE3A8MV23 424 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 FABP7O15540 132 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 RGS11O94810 467 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 SERPINA5P05154 406 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 MMP7P09237 267 aaPredicted RBP8.08□□□□□ -1.12
HTT-205ENST00000509043 GSTT2P0CG29 244 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 PTHLHP12272 177 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 B4GALT1P15291 398 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 HIST1H1DP16402 221 aaKnown RBP8.08□□□□□ -1.12
HTT-205ENST00000509043 CPT2P23786 658 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 ARR3P36575 388 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 HTR5AP47898 357 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 GNG2P59768 71 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 RPS27AP62979 156 aaKnown RBP8.08□□□□□ -1.12
HTT-205ENST00000509043 ARG2P78540 354 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 PSG4Q00888 419 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 GUCA2AQ02747 115 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 GFOD2Q3B7J2 385 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 ZNF766Q5HY98 468 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 CLVS2Q5SYC1 327 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 TMEM42Q69YG0 159 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 IGFL2Q6UWQ7 119 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 LHFPL2Q6ZUX7 228 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 ZNF767PQ75MW2 155 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 SLC36A1Q7Z2H8 476 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 GALNTL5Q7Z4T8 443 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 TRAPPC6BQ86SZ2 158 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 ZDHHC22Q8N966 263 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 ACBD4Q8NC06 268 aa8.08□□□□□ -1.12
HTT-205ENST00000509043 CHST4Q8NCG5 386 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms