RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OR8B8Q15620 311 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 LRRN1Q6UXK5 716 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 NLRC3Q7RTR2 1065 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 PAPD5Q8NDF8 572 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 OR8S1Q8NH09 359 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 Q8TCH9 128 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 SUCNR1Q9BXA5 334 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 TTTY10Q9BZA0 68 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 OPA3Q9H6K4 179 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 PAPOLBQ9NRJ5 636 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF319Q9P2F9 582 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 POLR3KQ9Y2Y1 108 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 PSMD9O00233 223 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 PRODHO43272 600 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 GSK3AP49840 483 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 DAPP51397 102 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 POU4F2Q12837 409 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 BNIP1Q12981 228 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 SNAPC1Q16533 368 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 KLF17Q5JT82 389 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 DCDC5Q6ZRR9 648 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 BCL6BQ8N143 479 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 ERGIC1Q969X5 290 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 SPSB4Q96A44 273 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 TECTBQ96PL2 329 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 TEX12Q9BXU0 123 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 OR10A2Q9H208 303 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 SLC25A19Q9HC21 320 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 ESM1Q9NQ30 184 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 CLN8Q9UBY8 286 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF69Q9UC07 566 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 ANK2Q01484 3957 aa12.36□□□□□ -0.43
UBE2D3-228ENST00000508974 TENM1Q9UKZ4 2725 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 IGHV3OR15-7A0A075B7D8 119 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 IGHV2-70DA0A0C4DH43 119 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 hCG_38984A0A1B0GV85 526 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 TRIM77I1YAP6 450 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 MITFO75030 526 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 APOC1P02654 83 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 SLC2A5P22732 501 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 FPR2P25090 351 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 CRISP1P54107 249 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 CSNK2BP67870 215 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 BTNL3Q6UXE8 466 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 WDR86Q86TI4 376 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 SIGLECL1Q8N7X8 197 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 PAPOLGQ9BWT3 736 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 SP140LQ9H930 580 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 C14orf119Q9NWQ9 140 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 LAMP5Q9UJQ1 280 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 NUP50Q9UKX7 468 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 LRP12Q9Y561 859 aa12.35□□□□□ -0.43
UBE2D3-228ENST00000508974 LGALS8O00214 317 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 ADAM20O43506 726 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 GYPAP02724 150 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 IGHV4-38-2P0DP08 117 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 EGR1P18146 543 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 GNALP38405 381 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 DDOSTP39656 456 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 GMFBP60983 142 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 PAX2Q02962 417 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 PTGES3Q15185 160 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 SLC35D3Q5M8T2 416 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 C1orf146Q5VVC0 180 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 FAHD1Q6P587 224 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 USP43Q70EL4 1123 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 BCDIN3DQ7Z5W3 292 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 KRT77Q7Z794 578 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 AMIGO2Q86SJ2 522 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 GCSAMQ8N6F7 178 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 SPERTQ8NA61 448 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 OR52H1Q8NGJ2 320 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 OR5K1Q8NHB7 308 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 RAB40AQ8WXH6 277 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 UTP4Q969X6 686 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 KRT84Q9NSB2 600 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 RHBDD3Q9Y3P4 386 aa12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 SOX21Q9Y651 276 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-228ENST00000508974 TRAV40A0A0B4J280 105 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 CCDC182A6NF36 153 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 OOEPA6NGQ2 149 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 C22orf46C9J442 243 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 PRKYO43930 277 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 PAX8Q06710 450 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 MZT1Q08AG7 82 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms