RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GK2Q14410 553 aaPredicted RBP12.76□□□□□ -0.37
DDX41-208ENST00000507955 C11orf88Q6PI97 169 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 GLIPR1L1Q6UWM5 242 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 OR5AS1Q8N127 324 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ZIC4Q8N9L1 334 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 RELL2Q8NC24 303 aaPredicted RBP12.76□□□□□ -0.37
DDX41-208ENST00000507955 ADPRHL1Q8NDY3 354 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 M1APQ8TC57 530 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ZC3H10Q96K80 434 aaKnown RBP12.76□□□□□ -0.37
DDX41-208ENST00000507955 SH2D2AQ9NP31 389 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 GPR160Q9UJ42 338 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 IGKV1-9A0A0C4DH69 117 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 SIGLEC5O15389 551 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 OR4E1P0C645 316 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ZNF735P0CB33 412 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ATF4P18848 351 aaPredicted RBP12.76□□□□□ -0.37
DDX41-208ENST00000507955 TAS2R19P59542 299 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 RSPO1Q2MKA7 263 aaPredicted RBP12.76□□□□□ -0.37
DDX41-208ENST00000507955 ZNF260Q3ZCT1 412 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 OVCH2Q7RTZ1 564 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 C1QL2Q7Z5L3 287 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 SLC22A24Q8N4F4 322 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 NKAIN3Q8N8D7 197 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 OR9K2Q8NGE7 335 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 ROBO4Q8WZ75 1007 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 LYZL4Q96KX0 146 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 TCFL5Q9UL49 500 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
DDX41-208ENST00000507955 SOCS1O15524 211 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 TRAPPC6AO75865 159 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 HCKP08631 526 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 FGF2P09038 288 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 ACTBP60709 375 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 ACTG1P63261 375 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 BAMBIQ13145 260 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 LIN54Q6MZP7 749 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 NAXDQ8IW45 347 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 MFFQ9GZY8 342 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 WDR13Q9H1Z4 485 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 PADI1Q9ULC6 663 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 BOD1L1Q8NFC6 3051 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 PMS2P2O95744 297 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 MPIG6BO95866 241 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 SUCLG1P53597 346 aaKnown RBP12.75□□□□□ -0.37
DDX41-208ENST00000507955 TRA2AQ13595 282 aaKnown RBP eCLIP12.75□□□□□ -0.371e-6■□□□□ 9.3
DDX41-208ENST00000507955 ENDOGQ14249 297 aaKnown RBP12.75□□□□□ -0.37
DDX41-208ENST00000507955 CDH26Q8IXH8 852 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 BVESQ8NE79 360 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 OR5M9Q8NGP3 310 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 OR10K1Q8NGX5 313 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 OR14L1PQ8NHC6 308 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 ST8SIA4Q92187 359 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 AQP3Q92482 292 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 IER2Q9BTL4 223 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 RAB22AQ9UL26 194 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 KCNK7Q9Y2U2 307 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 PINLYPA6NC86 204 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 METTL21EPA6NDL7 271 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 H3BUI4 141 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 MPPED2Q15777 294 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 WIPI1Q5MNZ9 446 aaPredicted RBP12.75□□□□□ -0.37
DDX41-208ENST00000507955 DCAF12Q5T6F0 453 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
DDX41-208ENST00000507955 SPINK14Q6IE38 97 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 ESX1Q8N693 406 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 MRGPRFQ96AM1 343 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 FBXO17Q96EF6 278 aa12.75□□□□□ -0.37
DDX41-208ENST00000507955 RPA2P15927 270 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 FAHP16930 419 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 CXADRP78310 365 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 PLAC9Q5JTB6 97 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 ZNF529Q6P280 563 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 TMEM229BQ8NBD8 167 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 PGAM5Q96HS1 289 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 GPER1Q99527 375 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 MRPS28Q9Y2Q9 187 aaKnown RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 A0A1W2PNU3 283 aaPredicted RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 RFPL4AA6NLU0 287 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 RFPL4AL1F8VTS6 287 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 CCSO14618 274 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 TLX3O43711 291 aaPredicted RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 SSX5O60225 188 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 CBR3O75828 277 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 HRH1P35367 487 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 TMEM123Q8N131 208 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 OR6K3Q8NGY3 331 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms