RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TGM6O95932 706 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 HTR1DP28221 377 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 GABRR2P28476 465 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 TALDO1P37837 337 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 OR2B8PP59922 312 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 LCN2P80188 198 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 PITPNAQ00169 270 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 PPIDQ08752 370 aaKnown RBP1.89□□□□□ -2.11
LSM6-205ENST00000507449 ZNF616Q08AN1 781 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 TFDP2Q14188 446 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 C5orf64Q2M2E5 130 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 KRTAP13-2Q52LG2 175 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 RWDD4Q6NW29 188 aaKnown RBP1.89□□□□□ -2.11
LSM6-205ENST00000507449 H3F3CQ6NXT2 135 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 ANGPTL8Q6UXH0 198 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 MRPL21Q7Z2W9 205 aaKnown RBP1.89□□□□□ -2.11
LSM6-205ENST00000507449 RAB43Q86YS6 212 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 OR4M1Q8NGD0 313 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 OR1J4Q8NGS1 313 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 RXFP4Q8TDU9 374 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 TOP1MTQ969P6 601 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 SCGB3A2Q96PL1 93 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 DOK1Q99704 481 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 BCL7BQ9BQE9 202 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 ZNF2Q9BSG1 426 aaPredicted RBP1.89□□□□□ -2.11
LSM6-205ENST00000507449 RSG1Q9BU20 258 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 BLZF1Q9H2G9 400 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 ZC4H2Q9NQZ6 224 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 FBXO8Q9NRD0 319 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 FBXO6Q9NRD1 293 aaPredicted RBP1.89□□□□□ -2.11
LSM6-205ENST00000507449 ZMAT5Q9UDW3 170 aaKnown RBP1.89□□□□□ -2.11
LSM6-205ENST00000507449 DDX19BQ9UMR2 479 aa1.89□□□□□ -2.11
LSM6-205ENST00000507449 PCM1Q15154 2024 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 DOCK9Q9BZ29 2069 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 A0A0A6YYD5 115 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 A0A0B4J2E0 115 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 SERPINE3A8MV23 424 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 TAAR5O14804 337 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 RRP8O43159 456 aaKnown RBP1.88□□□□□ -2.11
LSM6-205ENST00000507449 RCBTB2O95199 551 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 IGLV2-8P01709 118 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 TRBV12-3P01733 135 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 KLK1P06870 262 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 THRAP10827 490 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 CELP19835 753 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 MYL9P24844 172 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 PEX19P40855 299 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 TEX30Q5JUR7 227 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 OR2T5Q6IEZ7 315 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 IGFL1Q6UW32 110 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 UNQ9165/PRO28630Q6UXU0 137 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 ZNF101Q8IZC7 436 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 ZNF321PQ8N8H1 164 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 OR2T29Q8NH02 315 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 BAALCQ8WXS3 180 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 OR4K3Q96R72 315 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 TEAD3Q99594 435 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 CDX2Q99626 313 aaPredicted RBP1.88□□□□□ -2.11
LSM6-205ENST00000507449 TOLLIPQ9H0E2 274 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 RGCCQ9H4X1 137 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 REEP1Q9H902 201 aa1.88□□□□□ -2.11
LSM6-205ENST00000507449 EXOSC4Q9NPD3 245 aaKnown RBP1.88□□□□□ -2.11
LSM6-205ENST00000507449 MARCOQ9UEW3 520 aaPredicted RBP1.88□□□□□ -2.11
LSM6-205ENST00000507449 IGLV3-12A0A075B6K2 115 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 TRAV40A0A0B4J280 105 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CCL15-CCL14A0A0B4J2E2 113 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 IGKV6-21A0A0C4DH24 114 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CENPVL3A0A0U1RRI6 287 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 A0A1B0GUH1 482 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 A0A1W2PQ67 120 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 LINC01619G3V211 115 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 H3BN98 237 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 HSBP1O75506 76 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 RBBP9O75884 186 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 PAHP00439 452 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 PMCHP20382 165 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 PRLHRP49683 370 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 BCAP31P51572 246 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CMC4P56277 68 aaPredicted RBP1.87□□□□□ -2.11
LSM6-205ENST00000507449 AP1S2P56377 157 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CLDN6P56747 220 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 OR1Q1Q15612 314 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CCL15Q16663 113 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 SLC25A35Q3KQZ1 300 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 TMEM236Q5W0B7 351 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 AP1ARQ63HQ0 302 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 ULK3Q6PHR2 472 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 ASCL4Q6XD76 172 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 DRAM1Q8N682 238 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 RNF182Q8N6D2 247 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 SPANXA2-OT1Q8N9U9 137 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 OR5T1Q8NG75 326 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 PIH1D2Q8WWB5 315 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 ASZ1Q8WWH4 475 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CPNE4Q96A23 557 aaPredicted RBP1.87□□□□□ -2.11
LSM6-205ENST00000507449 NEURL4Q96JN8 1562 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 LINC00477Q96M19 166 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 TBL1YQ9BQ87 522 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 IL22Q9GZX6 179 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms