RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SLC16A9Q7RTY1 509 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 WDR86Q86TI4 376 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 KIR3DL3Q8N743 410 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 OR6K6Q8NGW6 343 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 OR8S1Q8NH09 359 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 LRRC29Q8WV35 223 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 GATAD2BQ8WXI9 593 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 ST8SIA4Q92187 359 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 LHX4Q969G2 390 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 SPSB4Q96A44 273 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 FAM71F1Q96KD3 344 aaPredicted RBP9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 NMNAT2Q9BZQ4 307 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 BEX1Q9HBH7 125 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 NDE1Q9NXR1 346 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 VNN3Q9NY84 501 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 C1RLQ9NZP8 487 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 BAIAP2Q9UQB8 552 aa9.55□□□□□ -0.88
HMGCS1-204ENST00000507293 A0A1B0GUS0 222 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 A0A1B0GW55 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 NDUFA7O95182 113 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L2P0CJ85 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L3P0CJ86 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L4P0CJ87 422 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L5P0CJ88 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L6P0CJ89 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L7P0CJ90 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DDOSTP39656 456 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 MAGEA2P43356 314 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 ARF6P62330 175 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 GRB2P62993 217 aaKnown RBP9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 CSNK2BP67870 215 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 ELF3P78545 371 aaPredicted RBP9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 FAM3AP98173 230 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 EIF2B1Q14232 305 aaKnown RBP9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 PDCD1Q15116 288 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 TIGD6Q17RP2 521 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 SPATS1Q496A3 300 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 TEX30Q5JUR7 227 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 TEX36Q5VZQ5 186 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4L9Q6RFH8 374 aaPredicted RBP9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 C17orf107Q6ZR85 190 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 FGFRL1Q8N441 504 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 SCCPDHQ8NBX0 429 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 OR2T33Q8NG76 320 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 OR6N2Q8NGY6 317 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 ACOXLQ9NUZ1 547 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 ACTR3BQ9P1U1 418 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 DUX4Q9UBX2 424 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 POMT1Q9Y6A1 747 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 MEGF8Q7Z7M0 2845 aa9.54□□□□□ -0.88
HMGCS1-204ENST00000507293 A0A0U1RQK1 487 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 hCG_38984A0A1B0GV85 526 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 TCRBV5S2A0A599 114 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 RIIAD1A6NNX1 92 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 ECDO95905 644 aaPredicted RBP9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 LHBP01229 141 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 IFNGP01579 166 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 HSD11B1P28845 292 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 GRK5P34947 590 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 SLC15A1P46059 708 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 BLVRAP53004 296 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 DEFA6Q01524 100 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 GFOD2Q3B7J2 385 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 WDR38Q5JTN6 314 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 LINC01590Q5TEZ4 76 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 OLFML2AQ68BL7 652 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 FAM57BQ71RH2 274 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 PRSS45Q7RTY3 260 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 DPY19L4Q7Z388 723 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 ERI1Q8IV48 349 aaKnown RBP9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 C11orf53Q8IXP5 236 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 PDZD9Q8IXQ8 264 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 OR1M1Q8NGA1 313 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 SSMEM1Q8WWF3 244 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 SGK3Q96BR1 496 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 REEP6Q96HR9 211 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 AMELYQ99218 206 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 CCL13Q99616 98 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 ABHD6Q9BV23 337 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 TOR3AQ9H497 397 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 MAGIXQ9H6Y5 334 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 PPP1R3EQ9H7J1 279 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 REEP1Q9H902 201 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 MED20Q9H944 212 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 RNPEPL1Q9HAU8 725 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 DNAJC27Q9NZQ0 273 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 PDP1Q9P0J1 537 aaPredicted RBP9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 KAAG1Q9UBP8 84 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 RPUSD1Q9UJJ7 312 aaKnown RBP9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 ARL2BPQ9Y2Y0 163 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 SAMHD1Q9Y3Z3 626 aaKnown RBP9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 U3KQV3 271 aa9.53□□□□□ -0.88
HMGCS1-204ENST00000507293 CLPSL1A2RUU4 121 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 FAM183AA6NL82 134 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 GPR137BO60478 399 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 DCTN3O75935 186 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 IGHV4-59P01825 116 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 MUC1P15941 1255 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms