RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF540Q8NDQ6 660 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 OR13G1Q8NGZ3 307 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 HAVCR2Q8TDQ0 301 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 SPRYD4Q8WW59 207 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 PPP1R14AQ96A00 147 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 LYZL4Q96KX0 146 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 SLC30A2Q9BRI3 323 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 ACOXLQ9NUZ1 547 aa10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 CAB39Q9Y376 341 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-208ENST00000504489 LOC390937A0A1W2PQ73 354 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 LILRA1O75019 489 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 IGHV1-46P01743 117 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 ATP6V1B1P15313 513 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 PSMB10P40306 273 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 GSK3AP49840 483 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 MVKQ03426 396 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 TNK1Q13470 666 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 TESK1Q15569 626 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 OR8B8Q15620 311 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 TMPRSS11AQ6ZMR5 421 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 Q6ZSR3 168 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 AHSA2Q719I0 299 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 OR5AS1Q8N127 324 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 STX19Q8N4C7 294 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 CSNK2A3Q8NEV1 391 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 OR56B2PQ8NGI1 322 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 OR2G2Q8NGZ5 317 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 GTF3AQ92664 365 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 SLC22A4Q9H015 551 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 DUSP21Q9H596 190 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 ISG20L2Q9H9L3 353 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 MSL2Q9HCI7 577 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 TMEM100Q9NV29 134 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 CHCHD3Q9NX63 227 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 MRPL15Q9P015 296 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 ITGB1BP2Q9UKP3 347 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 TPRKBQ9Y3C4 175 aa10.13□□□□□ -0.79
PDLIM5-208ENST00000504489 MAST4O15021 2626 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 A0A1B0GTI1 187 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 PTGES3LE9PB15 166 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 SPRY3O43610 288 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 CDK1P06493 297 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 CD55P08174 381 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 HTR1AP08908 422 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 CRHBPP24387 322 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 MAGEB1P43366 347 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 MAP2K3P46734 347 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 TGM4P49221 684 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 CCR9P51686 369 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 GBX2P52951 348 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 SLC35A2P78381 396 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 GFOD2Q3B7J2 385 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 WDR38Q5JTN6 314 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 RBM48Q5RL73 367 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 RNLSQ5VYX0 342 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 DNM1P46Q6ZS02 220 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 KRT74Q7RTS7 529 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 PRSS35Q8N3Z0 413 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 KLHL36Q8N4N3 616 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 PLPP7Q8NBV4 271 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 BHLHE23Q8NDY6 225 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 OR52N1Q8NH53 320 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 OR51E1Q8TCB6 317 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 MYDGFQ969H8 173 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 MYOZ1Q9NP98 299 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 GPR84Q9NQS5 396 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 CLEC2DQ9UHP7 191 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 GTF2A1LQ9UNN4 478 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 SLC22A13Q9Y226 551 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 NOP16Q9Y3C1 178 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 PCDHGB5Q9Y5G0 923 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 CSMD1Q96PZ7 3565 aa10.12□□□□□ -0.79
PDLIM5-208ENST00000504489 OR4C45A6NMZ5 311 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 MLNRO43193 412 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 SSX4O60224 188 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 GMDSO60547 372 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 MTRF1O75570 445 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 NCR1O76036 304 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 HPXP02790 462 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 ISG15P05161 165 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 DAOP14920 347 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 CCL1P22362 96 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 TNFSF4P23510 183 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 ACKR3P25106 362 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 C21orf33P30042 268 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 DSCR9P59020 149 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 NANOS3P60323 173 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 CCL8P80075 99 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 MRPS11P82912 194 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 ALKBH1Q13686 389 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 TSTQ16762 297 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 Q5PR19 223 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 ZBTB37Q5TC79 503 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 OR2G6Q5TZ20 316 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 KLBQ86Z14 1044 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 FTMTQ8N4E7 242 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms