RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TRIM36Q9NQ86 728 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 FRRS1LQ9P0K9 344 aa17.13■□□□□ 0.33
CTSD-206ENST00000497544 MYEF2Q9P2K5 600 aaKnown RBP17.13■□□□□ 0.33
CTSD-206ENST00000497544 TRBV2A0A0J9YWF9 115 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 PLSCR5A0PG75 271 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 IQCF6A8MYZ5 107 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 M0R233 179 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 P2RY10O00398 339 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 RAF1P04049 648 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 DDOSTP39656 456 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 KIR3DL2P43630 455 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 CCR9P51686 369 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 GTF2A1P52655 376 aaPredicted RBP17.12■□□□□ 0.33
CTSD-206ENST00000497544 NANOS3P60323 173 aaKnown RBP17.12■□□□□ 0.33
CTSD-206ENST00000497544 FAM3AP98173 230 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 MED22Q15528 200 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 ALKBH6Q3KRA9 238 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 CCDC58Q4VC31 144 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 RPL22L1Q6P5R6 122 aaKnown RBP17.12■□□□□ 0.33
CTSD-206ENST00000497544 PAMR1Q6UXH9 720 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 OR5AS1Q8N127 324 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 SVOPQ8N4V2 548 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 RNF166Q96A37 237 aaPredicted RBP17.12■□□□□ 0.33
CTSD-206ENST00000497544 LYZL4Q96KX0 146 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 GPR84Q9NQS5 396 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 PLEKHA6Q9Y2H5 1048 aa17.12■□□□□ 0.33
CTSD-206ENST00000497544 A0A1B0GVI7 797 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 CD300LBA8K4G0 201 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 MTRF1O75570 445 aaKnown RBP17.11■□□□□ 0.33
CTSD-206ENST00000497544 TNFAIP8O95379 198 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 DNASE1P24855 282 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 ALDH3B1P43353 468 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 GSK3AP49840 483 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 CDH15P55291 814 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 TAS2R43P59537 309 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 SPHARQ15513 63 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 KCTD21Q4G0X4 260 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 TMEM244Q5VVB8 128 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 C11orf71Q6IPW1 123 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 ZNF676Q8N7Q3 588 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 ZNF485Q8NCK3 441 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 ITFG2Q969R8 447 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 FAM71F1Q96KD3 344 aaPredicted RBP17.11■□□□□ 0.33
CTSD-206ENST00000497544 COMMD4Q9H0A8 199 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 MS4A5Q9H3V2 200 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 CXorf56Q9H5V9 222 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 CYSLTR2Q9NS75 346 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 CGGBP1Q9UFW8 167 aaPredicted RBP17.11■□□□□ 0.33
CTSD-206ENST00000497544 ST6GALNAC2Q9UJ37 374 aa17.11■□□□□ 0.33
CTSD-206ENST00000497544 hCG_38984A0A1B0GV85 526 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 OGG1O15527 345 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 UBCP0CG48 685 aaKnown RBP17.1■□□□□ 0.33
CTSD-206ENST00000497544 ATP6V1B1P15313 513 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 MAP2K3P46734 347 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 DOK3Q7L591 496 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 BHLHE23Q8NDY6 225 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 OR8G5Q8NG78 346 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 OR56B2PQ8NGI1 322 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 OR5AK2Q8NH90 309 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 OR5M11Q96RB7 305 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 VRK1Q99986 396 aaPredicted RBP17.1■□□□□ 0.33
CTSD-206ENST00000497544 SOX7Q9BT81 388 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 CACNG6Q9BXT2 260 aa17.1■□□□□ 0.33
CTSD-206ENST00000497544 USF3Q68DE3 2245 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 TMEM212A6NML5 194 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 OR4C45A6NMZ5 311 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 SYT7O43581 403 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 LALBAP00709 142 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 IGLV3-1P01715 115 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 RPSAP08865 295 aaKnown RBP17.09■□□□□ 0.33
CTSD-206ENST00000497544 CD53P19397 219 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 MAP2K4P45985 399 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 ZNF81P51508 661 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 MMP15P51511 669 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 CDK5R1Q15078 307 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 ZMAT1Q5H9K5 638 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 TMEM255AQ5JRV8 349 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 XAF1Q6GPH4 301 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 RDH10Q8IZV5 341 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 CSNK2A3Q8NEV1 391 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 MSL2Q9HCI7 577 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 TMEM100Q9NV29 134 aa17.09■□□□□ 0.33
CTSD-206ENST00000497544 A0A1B0GTI1 187 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 LOC390937A0A1W2PQ73 354 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ANKRD30BLA7E2S9 258 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 H3BSH0 61 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 DHRS3O75911 302 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ISG15P05161 165 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ERCC1P07992 297 aaPredicted RBP17.08■□□□□ 0.32
CTSD-206ENST00000497544 HSMCR30P0CW71 290 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 NAT2P11245 290 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ZNF12P17014 697 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 CDKN1AP38936 164 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 PPOXP50336 477 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 EMX1Q04741 257 aaPredicted RBP17.08■□□□□ 0.32
CTSD-206ENST00000497544 SLC3A1Q07837 685 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ACSM1Q08AH1 577 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 RIPPLY1Q0D2K3 151 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 OR8B8Q15620 311 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 TBCEQ15813 527 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms