RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ZFP1Q6P2D0 407 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 SLC35D2Q76EJ3 337 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 MDP1Q86V88 176 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 RAB43Q86YS6 212 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TMEM256Q8N2U0 113 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 OR1J4Q8NGS1 313 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 ZNF461Q8TAF7 563 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 RERGQ96A58 199 aaPredicted RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 ZNF707Q96C28 371 aaPredicted RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 LINC00477Q96M19 166 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 RBBP8Q99708 897 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TMEM243Q9BU79 118 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 EMC6Q9BV81 110 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 GGTLC1Q9BX51 225 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 FGF23Q9GZV9 251 aaPredicted RBP2.4□□□□□ -2.03
SMC4-225ENST00000497203 REEP1Q9H902 201 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 SLC38A10Q9HBR0 1119 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 PRSS16Q9NQE7 514 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 SIRT7Q9NRC8 400 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TUBG2Q9NRH3 451 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 TREX1Q9NSU2 369 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 RHBDL2Q9NX52 303 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 SLIT3O75094 1523 aa2.4□□□□□ -2.03
SMC4-225ENST00000497203 IGHV7-4-1A0A0J9YVY3 117 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CENPVL3A0A0U1RRI6 287 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 A0A1B0GUH1 482 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 A0A1W2PPV4 95 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 C7orf66A4D0T2 115 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CTNSO60931 367 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 UPK1BO75841 260 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CCNE2O96020 404 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CD74P04233 296 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 KLK1P06870 262 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 HOXB8P17481 243 aaPredicted RBP2.39□□□□□ -2.03
SMC4-225ENST00000497203 CSKP41240 450 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 ERFP50548 548 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 NAB1Q13506 487 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 TSC22D1Q15714 1073 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 YIF1BQ5BJH7 314 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CAVIN4Q5BKX8 364 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 OR2T5Q6IEZ7 315 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 SHISA6Q6ZSJ9 500 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 LINC00336Q6ZUF6 198 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 NDUFAF7Q7L592 441 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 OR2W3Q7Z3T1 314 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 FBXO36Q8NEA4 188 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 OR2T29Q8NH02 315 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 RXFP4Q8TDU9 374 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 KIAA1143Q96AT1 154 aaPredicted RBP2.39□□□□□ -2.03
SMC4-225ENST00000497203 RBMXL1Q96E39 390 aaKnown RBP2.39□□□□□ -2.03
SMC4-225ENST00000497203 OR10C1Q96KK4 312 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 NAA50Q9GZZ1 169 aaKnown RBP2.39□□□□□ -2.03
SMC4-225ENST00000497203 OR2AG1Q9H205 316 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 ARMC7Q9H6L4 198 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 CES1P1Q9UKY3 287 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 UBIAD1Q9Y5Z9 338 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 PLA2R1Q13018 1463 aa2.39□□□□□ -2.03
SMC4-225ENST00000497203 TRAV40A0A0B4J280 105 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 LRCOL1A6NCL2 159 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 NDUFC2-KCTD14E9PQ53 114 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 SLC19A2O60779 497 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 CRYGCP07315 174 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 CPN2P22792 545 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 ME2P23368 584 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 CD70P32970 193 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 GGT2P36268 569 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 ARL2P36404 184 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 PSMC5P62195 406 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 RPL18AQ02543 176 aaKnown RBP2.38□□□□□ -2.03
SMC4-225ENST00000497203 SIGLEC14Q08ET2 396 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 RNASE13Q5GAN3 156 aaKnown RBP2.38□□□□□ -2.03
SMC4-225ENST00000497203 GUSBP11Q6P575 273 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 ZNF880Q6PDB4 577 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 IGFL3Q6UXB1 125 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 SLC30A8Q8IWU4 369 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 NECAP1Q8NC96 275 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 TTLQ8NG68 377 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 OR6K6Q8NGW6 343 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 OR10Z1Q8NGY1 313 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 OR52P1PQ8NH57 321 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 TCP10LQ8TDR4 215 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 MITD1Q8WV92 249 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 SLC25A46Q96AG3 418 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 RDH12Q96NR8 316 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 KCNS3Q9BQ31 491 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 FBXO44Q9H4M3 255 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 LZTFL1Q9NQ48 299 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 OR51B2Q9Y5P1 312 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 AHDC1Q5TGY3 1603 aaPredicted RBP2.38□□□□□ -2.03
SMC4-225ENST00000497203 MROH5Q6ZUA9 1318 aa2.38□□□□□ -2.03
SMC4-225ENST00000497203 COL4A4P53420 1690 aaPredicted RBP2.37□□□□□ -2.03
SMC4-225ENST00000497203 ANKRD12Q6UB98 2062 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 KIF27Q86VH2 1401 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 OR5H1A6NKK0 313 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 GATBO75879 557 aaKnown RBP2.37□□□□□ -2.03
SMC4-225ENST00000497203 CCNKO75909 580 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ETHE1O95571 254 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 MT-ND4P03905 459 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms