RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 IFT46Q9NQC8 304 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 GPR84Q9NQS5 396 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 PCDHB16Q9NRJ7 776 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ATPIF1Q9UII2 106 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 SCP2D1Q9UJQ7 156 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 ING4Q9UNL4 249 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 MRPS18BQ9Y676 258 aaKnown RBP6.1□□□□□ -1.43
USP39-219ENST00000496047 DOCK7Q96N67 2140 aa6.1□□□□□ -1.43
USP39-219ENST00000496047 FREM1Q5H8C1 2179 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 TRAV6A0A075B6T7 132 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 A0A1B0GUH1 482 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 C7orf66A4D0T2 115 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PMS2P1A4D2B8 440 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ZNF716A6NP11 495 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 FAM166BA8MTA8 275 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 DISC1C4P0D8 188 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 F5H5K5 113 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 H7C417 338 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 XRCC2O43543 280 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 CREBL2O60519 120 aaPredicted RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 RAMP1O60894 148 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 NEURL1O76050 574 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 WNT11O96014 354 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 CHRM2P08172 466 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PSMB1P20618 241 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 ERP29P30040 261 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 CBX5P45973 191 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 HTR5AP47898 357 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PTH2RP49190 550 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 SRP9P49458 86 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 GFRA1P56159 465 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 CD83Q01151 205 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PMPCAQ10713 525 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ENDOGQ14249 297 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 ESPL1Q14674 2120 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 SLC10A1Q14973 349 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 NDUFA5Q16718 116 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ACTBL2Q562R1 376 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ZNF766Q5HY98 468 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 FAM166AQ6J272 317 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 TMEM53Q6P2H8 277 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 IGF2-ASQ6U949 168 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PRSS45Q7RTY3 260 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 P4HA3Q7Z4N8 544 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 GALNTL5Q7Z4T8 443 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 NOXA1Q86UR1 476 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 STEAP2Q8NFT2 490 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 OR56B1Q8NGI3 324 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 OR10S1Q8NGN2 331 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 OR6F1Q8NGZ6 308 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 KCNG3Q8TAE7 436 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 GIMAP1Q8WWP7 306 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ROBO4Q8WZ75 1007 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PSMF1Q92530 271 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ADGRG7Q96K78 797 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 ALKBH3Q96Q83 286 aaPredicted RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 TRAF4Q9BUZ4 470 aaPredicted RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 RANBP3Q9H6Z4 567 aaPredicted RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 CRLF2Q9HC73 371 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 HRASLSQ9HDD0 168 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 DEPPQ9NTK1 212 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 TMEM38BQ9NVV0 291 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 MTFP1Q9UDX5 166 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 CGGBP1Q9UFW8 167 aaPredicted RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 ZNF222Q9UK12 451 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 PLEKHA6Q9Y2H5 1048 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 MRPS28Q9Y2Q9 187 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 RBMX2Q9Y388 322 aaKnown RBP6.09□□□□□ -1.43
USP39-219ENST00000496047 TIMM10BQ9Y5J6 103 aa6.09□□□□□ -1.43
USP39-219ENST00000496047 IGKV3D-15A0A087WSY6 115 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 FAM172BPA6NC97 362 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ZNF891A8MT65 544 aaPredicted RBP6.08□□□□□ -1.44
USP39-219ENST00000496047 ZNF724A8MTY0 619 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 CDRT15L2A8MXV6 281 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 H0YC42 278 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 MASP2O00187 686 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 LANCL1O43813 399 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ALX3O95076 343 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 F10P00742 488 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 C1QBP02746 253 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 RFPL3SP0C7P2 107 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ZNF708P17019 499 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 TBPP20226 339 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 CSRP1P21291 193 aaKnown RBP6.08□□□□□ -1.44
USP39-219ENST00000496047 PRKACBP22694 351 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 MAGEA5P43359 124 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 STARP49675 285 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 LHX2P50458 406 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 SOX8P57073 446 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 GNG2P59768 71 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 PPIAP62937 165 aaKnown RBP6.08□□□□□ -1.44
USP39-219ENST00000496047 HIST1H3AP68431 136 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 PLP2Q04941 152 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 SRYQ05066 204 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 FOXO1Q12778 655 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 HYAL4Q2M3T9 481 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 CEACAM16Q2WEN9 425 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 HIST2H3PS2Q5TEC6 136 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ZNF813Q6ZN06 617 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms