RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 E2F6O75461 281 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 LIPFP07098 398 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 H2BFMP0C1H6 154 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 OSMP13725 252 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 ANOS1P23352 680 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 PRTN3P24158 256 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 FAM3AP98173 230 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 CDK5Q00535 292 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 DNAL1Q4LDG9 190 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 SLC16A9Q7RTY1 509 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 TRPM8Q7Z2W7 1104 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 SPATA24Q86W54 205 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 TIGD4Q8IY51 512 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 PARP8Q8N3A8 854 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 THEM6Q8WUY1 208 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-214ENST00000496043 REEP6Q96HR9 211 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 TEX12Q9BXU0 123 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 OR10A2Q9H208 303 aa10.62□□□□□ -0.71
PTPRF-214ENST00000496043 MMADHCQ9H3L0 296 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-214ENST00000496043 ZMAT3Q9HA38 289 aaKnown RBP10.62□□□□□ -0.71
PTPRF-214ENST00000496043 IGHV3OR16-10A0A075B7F0 116 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 OOEPA6NGQ2 149 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 A6NLC8 198 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 C3orf80F5H4A9 247 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 TNFRSF13BO14836 293 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-214ENST00000496043 ADAM20O43506 726 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 ENSAO43768 121 aaKnown RBP10.61□□□□□ -0.71
PTPRF-214ENST00000496043 LHBP01229 141 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 PRKACGP22612 351 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 OPRL1P41146 370 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 GSK3AP49840 483 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF121P58317 390 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-214ENST00000496043 BPIFB3P59826 476 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 FOXL1Q12952 345 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 FLOT2Q14254 428 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 SNCBQ16143 134 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 KLHL12Q53G59 568 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 PLBD1Q6P4A8 553 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF826PQ6ZT77 177 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 C9orf139Q6ZV77 190 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 PRSS45Q7RTY3 260 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 CPOQ8IVL8 374 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 CSNK2A3Q8NEV1 391 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 BCAS4Q8TDM0 211 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 ZMYND19Q96E35 227 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-214ENST00000496043 PGAM5Q96HS1 289 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 TECTBQ96PL2 329 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 RGCCQ9H4X1 137 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 RNPEPL1Q9HAU8 725 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 BRD7Q9NPI1 651 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 DNAJC27Q9NZQ0 273 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 DNAJB9Q9UBS3 223 aa10.61□□□□□ -0.71
PTPRF-214ENST00000496043 hCG_1807616A0A1W2PRN6 198 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 PRODHO43272 600 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 TIPRLO75663 272 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 PLATP00750 562 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 LYNP07948 512 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 IGHV4-38-2P0DP08 117 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 HKR1P10072 659 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 GNALP38405 381 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 NAA10P41227 235 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-214ENST00000496043 FGF12P61328 243 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 CBX1P83916 185 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 SLC35D3Q5M8T2 416 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 GCSAMQ8N6F7 178 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 PAPD5Q8NDF8 572 aaKnown RBP10.6□□□□□ -0.71
PTPRF-214ENST00000496043 OTOSQ8NHW6 89 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 SLC25A28Q96A46 364 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF48Q96MX3 618 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-214ENST00000496043 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 AMELYQ99218 206 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 ZNF319Q9P2F9 582 aa10.6□□□□□ -0.71
PTPRF-214ENST00000496043 hCG_38984A0A1B0GV85 526 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 TCRBV3S1A0A5B6 114 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 DNAJC9-AS1A6NH13 148 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 FKBP6O75344 327 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 DNAJC8O75937 253 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-214ENST00000496043 GYPAP02724 150 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 RPS7P62081 194 aaKnown RBP10.59□□□□□ -0.71
PTPRF-214ENST00000496043 HOXA4Q00056 320 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-214ENST00000496043 SNAPC1Q16533 368 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 MICBQ29980 383 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 GFOD2Q3B7J2 385 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 C11orf91Q3C1V1 193 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 AWAT1Q58HT5 328 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 GPR157Q5UAW9 335 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 TEX36Q5VZQ5 186 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 C11orf53Q8IXP5 236 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 HS3ST5Q8IZT8 346 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 FTMTQ8N4E7 242 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 PNLDC1Q8NA58 520 aaKnown RBP10.59□□□□□ -0.71
PTPRF-214ENST00000496043 OR1M1Q8NGA1 313 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 SGMS2Q8NHU3 365 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 SLC7A6OSQ96CW6 309 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-214ENST00000496043 NRBF2Q96F24 287 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 MICU1Q9BPX6 476 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms