RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SPATC1Q76KD6 591 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 CPOQ8IVL8 374 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 HS3ST5Q8IZT8 346 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 PARP8Q8N3A8 854 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 FTMTQ8N4E7 242 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-209ENST00000495835 DACT3Q96B18 629 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-209ENST00000495835 ZMYND19Q96E35 227 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-209ENST00000495835 REEP6Q96HR9 211 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 CADM1Q9BY67 442 aaKnown RBP20.24■□□□□ 0.83
HLA-C-209ENST00000495835 CLN8Q9UBY8 286 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 ZNF391Q9UJN7 358 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 N6AMT1Q9Y5N5 214 aa20.24■□□□□ 0.83
HLA-C-209ENST00000495835 IGHV2-70DA0A0C4DH43 119 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 KIR2DS1A0A191URI9 304 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 LGALS8O00214 317 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 TIPRLO75663 272 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 CD80P33681 288 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 ZNF121P58317 390 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-209ENST00000495835 FAM201AQ5SY85 155 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 CSNK2A3Q8NEV1 391 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 SLC6A7Q99884 636 aa20.23■□□□□ 0.83
HLA-C-209ENST00000495835 TRAV38-1A0A0B4J264 116 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 hCG_38984A0A1B0GV85 526 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 CRISP1P54107 249 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 ESRRGP62508 458 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 C11orf91Q3C1V1 193 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 KLHL12Q53G59 568 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 WDR25Q64LD2 544 aaPredicted RBP20.22■□□□□ 0.83
HLA-C-209ENST00000495835 FAHD1Q6P587 224 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 RBMS3Q6XE24 437 aaKnown RBP20.22■□□□□ 0.83
HLA-C-209ENST00000495835 ZNF841Q6ZN19 808 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 FAM57BQ71RH2 274 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 THEM6Q8WUY1 208 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 UTP4Q969X6 686 aaKnown RBP20.22■□□□□ 0.83
HLA-C-209ENST00000495835 AMELYQ99218 206 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 RNPEPL1Q9HAU8 725 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 PAPOLBQ9NRJ5 636 aaKnown RBP20.22■□□□□ 0.83
HLA-C-209ENST00000495835 KIF17Q9P2E2 1029 aa20.22■□□□□ 0.83
HLA-C-209ENST00000495835 LHBP01229 141 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 SLC2A5P22732 501 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 COMPP49747 757 aaPredicted RBP20.21■□□□□ 0.83
HLA-C-209ENST00000495835 KLF17Q5JT82 389 aaPredicted RBP20.21■□□□□ 0.83
HLA-C-209ENST00000495835 CD276Q5ZPR3 534 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 DEGS2Q6QHC5 323 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 OR8S1Q8NH09 359 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 OR5K1Q8NHB7 308 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 UPRTQ96BW1 309 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 PGAM5Q96HS1 289 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 PRRG3Q9BZD7 231 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 ABCB9Q9NP78 766 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 C1orf123Q9NWV4 160 aa20.21■□□□□ 0.83
HLA-C-209ENST00000495835 ACOD1A6NK06 481 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 TNFRSF13BO14836 293 aaPredicted RBP20.2■□□□□ 0.82
HLA-C-209ENST00000495835 SELENOFO60613 162 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 GSK3AP49840 483 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 OR8B8Q15620 311 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 SNAPC1Q16533 368 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 LYPD2Q6UXB3 125 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 DOK3Q7L591 496 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 YIPF3Q9GZM5 350 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 DNAJC27Q9NZQ0 273 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 ERVK-18Q9QC07 812 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 MPC1Q9Y5U8 109 aa20.2■□□□□ 0.82
HLA-C-209ENST00000495835 TMEM89A2RUT3 159 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 OOEPA6NGQ2 149 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 LIPFP07098 398 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 GRPP07492 148 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 ALOX5APP20292 161 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 CFHR2P36980 270 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 RPS7P62081 194 aaKnown RBP20.19■□□□□ 0.82
HLA-C-209ENST00000495835 LCN1P1Q5VSP4 162 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 KCTD18Q6PI47 426 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-209ENST00000495835 C12orf54Q6X4T0 127 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 C9orf139Q6ZV77 190 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 GCSAMQ8N6F7 178 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 ZDHHC22Q8N966 263 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 TEAD3Q99594 435 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 NUDT16L1Q9BRJ7 211 aaKnown RBP20.19■□□□□ 0.82
HLA-C-209ENST00000495835 ZMAT3Q9HA38 289 aaKnown RBP20.19■□□□□ 0.82
HLA-C-209ENST00000495835 TVP23BQ9NYZ1 205 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 ZNF319Q9P2F9 582 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 LAMP5Q9UJQ1 280 aa20.19■□□□□ 0.82
HLA-C-209ENST00000495835 A6NLC8 198 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 RGS9O75916 674 aaPredicted RBP20.18■□□□□ 0.82
HLA-C-209ENST00000495835 DCTDP32321 178 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 GNALP38405 381 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 DAPP51397 102 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 BPIFB3P59826 476 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 ACTG1P63261 375 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 IL5RAQ01344 420 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 APOFQ13790 326 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 PTGES3Q15185 160 aaKnown RBP20.18■□□□□ 0.82
HLA-C-209ENST00000495835 TEX36Q5VZQ5 186 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 TMEM236Q5W0B7 351 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 GALNT4Q8N4A0 578 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 DUS3LQ96G46 650 aaKnown RBP20.18■□□□□ 0.82
HLA-C-209ENST00000495835 KAAG1Q9UBP8 84 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 ZNF69Q9UC07 566 aa20.18■□□□□ 0.82
HLA-C-209ENST00000495835 TMEM14AQ9Y6G1 99 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms