RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SGK3Q96BR1 496 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 REEP6Q96HR9 211 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 ABHD6Q9BV23 337 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 OR51V1Q9H2C8 321 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 SMURF1Q9HCE7 757 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 ERVK-18Q9QC07 812 aa12.17□□□□□ -0.46
ATG4B-223ENST00000493618 ENSAO43768 121 aaKnown RBP12.16□□□□□ -0.46
ATG4B-223ENST00000493618 FCN3O75636 299 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 GLCEO94923 617 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 RNASE1P07998 156 aaKnown RBP12.16□□□□□ -0.46
ATG4B-223ENST00000493618 SLC15A1P46059 708 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 ZNF121P58317 390 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-223ENST00000493618 FAM3AP98173 230 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 KCNJ8Q15842 424 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 ADGRG5Q8IZF4 528 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 HS3ST5Q8IZT8 346 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 FGFRL1Q8N441 504 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 GCSAMQ8N6F7 178 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 OR8S1Q8NH09 359 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 SLC25A28Q96A46 364 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 ASB9Q96DX5 294 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 THTPAQ9BU02 230 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 MARCH7Q9H992 704 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 ZMAT3Q9HA38 289 aaKnown RBP12.16□□□□□ -0.46
ATG4B-223ENST00000493618 C14orf119Q9NWQ9 140 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 ZNF319Q9P2F9 582 aa12.16□□□□□ -0.46
ATG4B-223ENST00000493618 PRPF19Q9UMS4 504 aaKnown RBP12.16□□□□□ -0.46
ATG4B-223ENST00000493618 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 A0A1B0GW55 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 GNGT2O14610 69 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 ACOT8O14734 319 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-223ENST00000493618 HOXA3O43365 443 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-223ENST00000493618 SELENOFO60613 162 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 OMGP23515 440 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 CFHR2P36980 270 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 NPY4RP50391 375 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 BLVRAP53004 296 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 CSNK2BP67870 215 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 GINS1Q14691 196 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 KLHL12Q53G59 568 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 PLBD1Q6P4A8 553 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-223ENST00000493618 CD300LDQ6UXZ3 194 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 PRSS45Q7RTY3 260 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 FAM90A1Q86YD7 464 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 SPERTQ8NA61 448 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 SGMS2Q8NHU3 365 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 LRRC29Q8WV35 223 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 CANT1Q8WVQ1 401 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 RNF133Q8WVZ7 376 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 TBX15Q96SF7 602 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 TOR3AQ9H497 397 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 OPA3Q9H6K4 179 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 UNKLQ9H9P5 680 aaKnown RBP12.15□□□□□ -0.46
ATG4B-223ENST00000493618 PDP1Q9P0J1 537 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-223ENST00000493618 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
ATG4B-223ENST00000493618 hCG_38984A0A1B0GV85 526 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 ZNF879B4DU55 563 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 DVL1O14640 695 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 TOX4O94842 621 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 FAM107AO95990 144 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 H2BFMP0C1H6 154 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 GSK3AP49840 483 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 GMFBP60983 142 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 MZT1Q08AG7 82 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 GPR157Q5UAW9 335 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 CD276Q5ZPR3 534 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 TIGD4Q8IY51 512 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 OR1M1Q8NGA1 313 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 THEM6Q8WUY1 208 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 ST8SIA4Q92187 359 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 SEH1LQ96EE3 360 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 OR10A2Q9H208 303 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 RHBDD3Q9Y3P4 386 aa12.14□□□□□ -0.47
ATG4B-223ENST00000493618 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 PRR23D1E9PI22 279 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-223ENST00000493618 CLDN34H7C241 214 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 TMPRSS2O15393 492 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 LHBP01229 141 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 PRR23D2P0DMB1 279 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-223ENST00000493618 MDKP21741 143 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-223ENST00000493618 PAICSP22234 425 aaKnown RBP12.13□□□□□ -0.47
ATG4B-223ENST00000493618 PRKACGP22612 351 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 DDOSTP39656 456 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms