RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 OR8B2Q96RD0 313 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 TMEM246Q9BRR3 403 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 C19orf24Q9BVV8 132 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 SSBP3Q9BWW4 388 aaPredicted RBP12.65□□□□□ -0.38
USP39-217ENST00000491659 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 GABARAPL1Q9H0R8 117 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 RGCCQ9H4X1 137 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 NIPAL2Q9H841 368 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 TMEM165Q9HC07 324 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 RNF7Q9UBF6 113 aa12.65□□□□□ -0.38
USP39-217ENST00000491659 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
USP39-217ENST00000491659 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.39
USP39-217ENST00000491659 A0A0A6YYJ9 748 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 hCG_38984A0A1B0GV85 526 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 A6NLC8 198 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 PTBP3O95758 552 aaKnown RBP12.64□□□□□ -0.39
USP39-217ENST00000491659 MRPL3P09001 348 aaKnown RBP12.64□□□□□ -0.39
USP39-217ENST00000491659 GNALP38405 381 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 GNB2P62879 340 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 MPPED2Q15777 294 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 KCNJ8Q15842 424 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 FAM201AQ5SY85 155 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
USP39-217ENST00000491659 LRRN1Q6UXK5 716 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 DCDC5Q6ZRR9 648 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 KRT77Q7Z794 578 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 LRTOMTQ8WZ04 291 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
USP39-217ENST00000491659 MRI1Q9BV20 369 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 KLHDC2Q9Y2U9 406 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 LRP12Q9Y561 859 aa12.64□□□□□ -0.39
USP39-217ENST00000491659 hCG_1807616A0A1W2PRN6 198 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 CCDC182A6NF36 153 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 PRKYO43930 277 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 MITFO75030 526 aaPredicted RBP12.63□□□□□ -0.39
USP39-217ENST00000491659 GRPP07492 148 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 WNT2P09544 360 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 ZNF12P17014 697 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 PITPNBP48739 271 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 GSK3AP49840 483 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 ZNF154Q13106 437 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 SLX4IPQ5VYV7 408 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 KDM4DQ6B0I6 523 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 BOLLQ8N9W6 283 aaKnown RBP12.63□□□□□ -0.39
USP39-217ENST00000491659 DEFB108BQ8NET1 73 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 TEAD3Q99594 435 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 PAPOLGQ9BWT3 736 aaKnown RBP12.63□□□□□ -0.39
USP39-217ENST00000491659 TRIM36Q9NQ86 728 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 MMP26Q9NRE1 261 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 C1orf123Q9NWV4 160 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 H2AFY2Q9P0M6 372 aaPredicted RBP12.63□□□□□ -0.39
USP39-217ENST00000491659 OPN4Q9UHM6 478 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 ZNF391Q9UJN7 358 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 TMEM14AQ9Y6G1 99 aa12.63□□□□□ -0.39
USP39-217ENST00000491659 SLC22A31A6NKX4 558 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 TRAPPC2LH3BP13 241 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 ALOX5APP20292 161 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 OR8B8Q15620 311 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 BTNL3Q6UXE8 466 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 TCEANCQ8N8B7 351 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 C19orf18Q8NEA5 215 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 TMEM163Q8TC26 289 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 CENPNQ96H22 339 aaPredicted RBP12.62□□□□□ -0.39
USP39-217ENST00000491659 SUCNR1Q9BXA5 334 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 MROQ9BYG7 248 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 ABCB9Q9NP78 766 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 ZNF319Q9P2F9 582 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 CLN8Q9UBY8 286 aa12.62□□□□□ -0.39
USP39-217ENST00000491659 DOCK11Q5JSL3 2073 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 ANXA2P2A6NMY6 339 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 M0R129 80 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 LGALS8O00214 317 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 PHYHO14832 338 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 CD80P33681 288 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 HCCSP53701 268 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 IL5RAQ01344 420 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 NXNL2Q5VZ03 156 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 DEGS2Q6QHC5 323 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 ASRGL1Q7L266 308 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 MEPCEQ7L2J0 689 aaKnown RBP12.61□□□□□ -0.39
USP39-217ENST00000491659 GID4Q8IVV7 300 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 OR8B12Q8NGG6 310 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 ASB17Q8WXJ9 295 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 JMJD8Q96S16 334 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 CIB1Q99828 191 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 MICU1Q9BPX6 476 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 OAZ3Q9UMX2 235 aa12.61□□□□□ -0.39
USP39-217ENST00000491659 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
USP39-217ENST00000491659 IGHV2-70DA0A0C4DH43 119 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms