RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 REEP6Q96HR9 211 aa14.99□□□□□ -0.01
HMGN1-219ENST00000491183 C1orf147Q96MC9 270 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-219ENST00000491183 C1orf123Q9NWV4 160 aa14.99□□□□□ -0.01
HMGN1-219ENST00000491183 DNAJC27Q9NZQ0 273 aa14.99□□□□□ -0.01
HMGN1-219ENST00000491183 CLN8Q9UBY8 286 aa14.99□□□□□ -0.01
HMGN1-219ENST00000491183 POMPQ9Y244 141 aa14.99□□□□□ -0.01
HMGN1-219ENST00000491183 IGHV3OR16-10A0A075B7F0 116 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 PRR23D1E9PI22 279 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-219ENST00000491183 LGALS8O00214 317 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 SELENOFO60613 162 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 FKBP6O75344 327 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 E2F6O75461 281 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 LHBP01229 141 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 PRR23D2P0DMB1 279 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-219ENST00000491183 HOXB6P17509 224 aaKnown RBP14.98□□□□□ -0.01
HMGN1-219ENST00000491183 PAICSP22234 425 aaKnown RBP14.98□□□□□ -0.01
HMGN1-219ENST00000491183 CBX1P83916 185 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 TIGD6Q17RP2 521 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 TMEM236Q5W0B7 351 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 WDR86Q86TI4 376 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 CPOQ8IVL8 374 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 C11orf53Q8IXP5 236 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 GCSAMQ8N6F7 178 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 NUDT16L1Q9BRJ7 211 aaKnown RBP14.98□□□□□ -0.01
HMGN1-219ENST00000491183 ZNF556Q9HAH1 456 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 DNAJB9Q9UBS3 223 aa14.98□□□□□ -0.01
HMGN1-219ENST00000491183 TENM1Q9UKZ4 2725 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 hCG_38984A0A1B0GV85 526 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 ANKRD30BLA7E2S9 258 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 C22orf46C9J442 243 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 C3orf80F5H4A9 247 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 PHYHO14832 338 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 PLATP00750 562 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 APOC1P02654 83 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 HMGN1P05114 100 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 H2BFMP0C1H6 154 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 ANXA8P13928 327 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 RBMS3Q6XE24 437 aaKnown RBP14.97□□□□□ -0.01
HMGN1-219ENST00000491183 PARP8Q8N3A8 854 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 BBS1Q8NFJ9 593 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 OTOSQ8NHW6 89 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 THEM6Q8WUY1 208 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 DUX5Q96PT3 197 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 MS4A7Q9GZW8 240 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-219ENST00000491183 SP140LQ9H930 580 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 BRD7Q9NPI1 651 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 C14orf119Q9NWQ9 140 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 KLHDC2Q9Y2U9 406 aa14.97□□□□□ -0.01
HMGN1-219ENST00000491183 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-219ENST00000491183 OOEPA6NGQ2 149 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 A6NLC8 198 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 FCN3O75636 299 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 DNAJC8O75937 253 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-219ENST00000491183 EGR1P18146 543 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 SLC2A5P22732 501 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 GSK3AP49840 483 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 OR8B8Q15620 311 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 C9orf139Q6ZV77 190 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 OR52H1Q8NGJ2 320 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 OR10A2Q9H208 303 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 RASSF4Q9H2L5 321 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 MMADHCQ9H3L0 296 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-219ENST00000491183 YY1AP1Q9H869 796 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 SLC25A19Q9HC21 320 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 RHBDD3Q9Y3P4 386 aa14.96□□□□□ -0.01
HMGN1-219ENST00000491183 TRAV38-1A0A0B4J264 116 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 TRAV40A0A0B4J280 105 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 DNAJC9-AS1A6NH13 148 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 GSC2O15499 205 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 PRODHO43272 600 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 ADAM20O43506 726 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 GYPAP02724 150 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 LYNP07948 512 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 PRTN3P24158 256 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 NAA10P41227 235 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-219ENST00000491183 NPY4RP50391 375 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 HCCSP53701 268 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 FGF12P61328 243 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 MZT1Q08AG7 82 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 POU4F2Q12837 409 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 KCNJ8Q15842 424 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 GFOD2Q3B7J2 385 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 FAM90A1Q86YD7 464 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 ZNF454Q8N9F8 522 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 OR8S1Q8NH09 359 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 PGAM5Q96HS1 289 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 CADM1Q9BY67 442 aaKnown RBP14.95□□□□□ -0.02
HMGN1-219ENST00000491183 SMURF1Q9HCE7 757 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 ERVK-18Q9QC07 812 aa14.95□□□□□ -0.02
HMGN1-219ENST00000491183 IGHV3OR15-7A0A075B7D8 119 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 hCG_1807616A0A1W2PRN6 198 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 NDUFA2O43678 99 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 ALOX5APP20292 161 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 CFL1P23528 166 aaKnown RBP14.94□□□□□ -0.02
HMGN1-219ENST00000491183 CSNK2BP67870 215 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 BAMBIQ13145 260 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 AWAT1Q58HT5 328 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 SLC35D3Q5M8T2 416 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 TEX36Q5VZQ5 186 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms