RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 SIGLEC9Q9Y336 463 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 IER3IP1Q9Y5U9 82 aa6.69□□□□□ -1.34
USP39-216ENST00000490193 DNAH9Q9NYC9 4486 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 hCG_1807616A0A1W2PRN6 198 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 A0A1W2PRQ8 180 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 MEIOCA2RUB1 952 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 A6NLC8 198 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 BBIP1A8MTZ0 92 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 H3BUX3 64 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 M0R1W7 72 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 BHLHE40O14503 412 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 GRPP07492 148 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 AMY2BP19961 511 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 OMPP47874 163 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 TGM4P49221 684 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 EMX1Q04741 257 aaPredicted RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 KLRD1Q13241 179 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 DGCR6Q14129 220 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 MICBQ29980 383 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 RFX4Q33E94 735 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 SNAI3Q3KNW1 292 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 IFI44LQ53G44 452 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 NKAPLQ5M9Q1 402 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 AGBL2Q5U5Z8 902 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 NCR3LG1Q68D85 454 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 STUMQ69YW2 141 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 DRAM2Q6UX65 266 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 RRM2BQ7LG56 351 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 LINC00346Q8IVM7 164 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 C11orf53Q8IXP5 236 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 FAM216BQ8N7L0 139 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 C11orf44Q8N8P7 122 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 OR2T12Q8NG77 320 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 OR2AE1Q8NHA4 323 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 WIPF2Q8TF74 440 aaPredicted RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 SGCDQ92629 289 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 SPTSSAQ969W0 71 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 AJUBAQ96IF1 538 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 FAM46AQ96IP4 442 aaKnown RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 RSRC1Q96IZ7 334 aaKnown RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 CCL13Q99616 98 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 SIKE1Q9BRV8 207 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 FAM234AQ9H0X4 552 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 DNTTIP1Q9H147 329 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 MEGF9Q9H1U4 602 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 TOR3AQ9H497 397 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 METTL8Q9H825 291 aaKnown RBP6.68□□□□□ -1.34
USP39-216ENST00000490193 MRGBPQ9NV56 204 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 KCNG2Q9UJ96 466 aa6.68□□□□□ -1.34
USP39-216ENST00000490193 IGHV3OR15-7A0A075B7D8 119 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 SCO2A0A1W2PP80 73 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 GGT3PA6NGU5 568 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 ADARB2-AS1A8MUL3 147 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 ACOT8O14734 319 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 MRASO14807 208 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 ARPC3O15145 178 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 NDUFB3O43676 98 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 TIPRLO75663 272 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 ANOS1P23352 680 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 GRK5P34947 590 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 DDOSTP39656 456 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 CENPAP49450 140 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 DLX1P56177 255 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 ELF3P78545 371 aaPredicted RBP6.67□□□□□ -1.34
USP39-216ENST00000490193 LRRC10Q5BKY1 277 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 GLYATL3Q5SZD4 288 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 FOXB2Q5VYV0 432 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 SMARCD3Q6STE5 483 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 WDR82Q6UXN9 313 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 CBLL1Q75N03 491 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.67□□□□□ -1.34
USP39-216ENST00000490193 WDR86Q86TI4 376 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 NDUFA11Q86Y39 141 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 Q8N2B8 174 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 PNKDQ8N490 385 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 WFDC9Q8NEX5 89 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 OR56B2PQ8NGI1 322 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 OR2AJ1Q8NGZ0 328 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 LRRC29Q8WV35 223 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 SPSB4Q96A44 273 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 MAP6Q96JE9 813 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 SSX3Q99909 188 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 TLNRD1Q9H1K6 362 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 MMP28Q9H239 520 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 SRA1Q9HD15 236 aaKnown RBP6.67□□□□□ -1.34
USP39-216ENST00000490193 ENPP4Q9Y6X5 453 aa6.67□□□□□ -1.34
USP39-216ENST00000490193 A0A1W2PRD5 423 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 A0A1W2PRF3 423 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 A0A1W2PRM7 423 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 XRCC2O43543 280 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 FBXO24O75426 580 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 RENP00797 406 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 NOS3P29474 1203 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 NAA10P41227 235 aaPredicted RBP6.66□□□□□ -1.34
USP39-216ENST00000490193 CAV3P56539 151 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 PRB3Q04118 309 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms