RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RNF7Q9UBF6 113 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 ZNF69Q9UC07 566 aa11.7□□□□□ -0.54
VTI1A-206ENST00000489142 SOX21Q9Y651 276 aaPredicted RBP11.7□□□□□ -0.54
VTI1A-206ENST00000489142 IGHV3OR15-7A0A075B7D8 119 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 A0A0A6YYJ9 748 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 hCG_1807616A0A1W2PRN6 198 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 ANKRD30BLA7E2S9 258 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 PSMD9O00233 223 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 MITFO75030 526 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-206ENST00000489142 LYNP07948 512 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 IGHV4-38-2P0DP08 117 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 EGR1P18146 543 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 GSK3AP49840 483 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 ACTG1P63261 375 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 CSNK2BP67870 215 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-206ENST00000489142 OR8B8Q15620 311 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 DCDC5Q6ZRR9 648 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 NLRC3Q7RTR2 1065 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 BCDIN3DQ7Z5W3 292 aaKnown RBP11.69□□□□□ -0.54
VTI1A-206ENST00000489142 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-206ENST00000489142 SIGLECL1Q8N7X8 197 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 OR8S1Q8NH09 359 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 ERGIC1Q969X5 290 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 UTP4Q969X6 686 aaKnown RBP11.69□□□□□ -0.54
VTI1A-206ENST00000489142 SUCNR1Q9BXA5 334 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 OR10A2Q9H208 303 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 TOR3AQ9H497 397 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 OPA3Q9H6K4 179 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 SLC25A19Q9HC21 320 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 CTSZQ9UBR2 303 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 NOP16Q9Y3C1 178 aaKnown RBP11.69□□□□□ -0.54
VTI1A-206ENST00000489142 TENM1Q9UKZ4 2725 aa11.69□□□□□ -0.54
VTI1A-206ENST00000489142 IGHV2-70DA0A0C4DH43 119 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 CCDC182A6NF36 153 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 PRODHO43272 600 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 PTBP3O95758 552 aaKnown RBP11.68□□□□□ -0.54
VTI1A-206ENST00000489142 GYPAP02724 150 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 HOXB6P17509 224 aaKnown RBP11.68□□□□□ -0.54
VTI1A-206ENST00000489142 CRISP1P54107 249 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 PAX8Q06710 450 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 SNAPC1Q16533 368 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 WDR25Q64LD2 544 aaPredicted RBP11.68□□□□□ -0.54
VTI1A-206ENST00000489142 FAHD1Q6P587 224 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 ZNF841Q6ZN19 808 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 ZDHHC22Q8N966 263 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 RAB40AQ8WXH6 277 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 LYZL4Q96KX0 146 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 TECTBQ96PL2 329 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 PAPOLGQ9BWT3 736 aaKnown RBP11.68□□□□□ -0.54
VTI1A-206ENST00000489142 RASSF4Q9H2L5 321 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 CLN8Q9UBY8 286 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 NUP50Q9UKX7 468 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 RHBDD3Q9Y3P4 386 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 LRP12Q9Y561 859 aa11.68□□□□□ -0.54
VTI1A-206ENST00000489142 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-206ENST00000489142 PRR32B1ATL7 298 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 C22orf46C9J442 243 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 TRIM77I1YAP6 450 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 LGALS8O00214 317 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 ADAM20O43506 726 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 PRKYO43930 277 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 FPR2P25090 351 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 ACKR3P25106 362 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 EPHA2P29317 976 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 GMFBP60983 142 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
VTI1A-206ENST00000489142 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 BTNL3Q6UXE8 466 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 USP43Q70EL4 1123 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 AMIGO2Q86SJ2 522 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 GCSAMQ8N6F7 178 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 OR5K1Q8NHB7 308 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 LRRC29Q8WV35 223 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 DACT3Q96B18 629 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-206ENST00000489142 SEH1LQ96EE3 360 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-206ENST00000489142 NUDT16L1Q9BRJ7 211 aaKnown RBP11.67□□□□□ -0.54
VTI1A-206ENST00000489142 SMURF1Q9HCE7 757 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 LAMP5Q9UJQ1 280 aa11.67□□□□□ -0.54
VTI1A-206ENST00000489142 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 A0A1B0GW55 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 OOEPA6NGQ2 149 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 FCN3O75636 299 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 FSTL3O95633 263 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 APOC1P02654 83 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L2P0CJ85 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L3P0CJ86 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L4P0CJ87 422 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L5P0CJ88 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L6P0CJ89 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L7P0CJ90 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 PSMB10P40306 273 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 FGF12P61328 243 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 ATP6AP1Q15904 470 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DMRTC1Q5HYR2 192 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms