RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ZNF121P58317 390 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-213ENST00000489045 CBX1P83916 185 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 FAM3AP98173 230 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 ZNF826PQ6ZT77 177 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 PRSS45Q7RTY3 260 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 PARP8Q8N3A8 854 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 SGK3Q96BR1 496 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 SLC7A6OSQ96CW6 309 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-213ENST00000489045 NUDT16L1Q9BRJ7 211 aaKnown RBP19.17■□□□□ 0.66
COL9A3-213ENST00000489045 CTSZQ9UBR2 303 aa19.17■□□□□ 0.66
COL9A3-213ENST00000489045 IGHV3OR16-10A0A075B7F0 116 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 KIR2DS1A0A191URI9 304 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 hCG_38984A0A1B0GV85 526 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 TCRBV3S1A0A5B6 114 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 A6NLC8 198 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 ANKRD30BLA7E2S9 258 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 C3orf80F5H4A9 247 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 SELENOFO60613 162 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 FKBP6O75344 327 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 H2BFMP0C1H6 154 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 CDK5Q00535 292 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 MZT1Q08AG7 82 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 OR8B8Q15620 311 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 KCNJ8Q15842 424 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 GFOD2Q3B7J2 385 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 UPRTQ96BW1 309 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 ZNF48Q96MX3 618 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-213ENST00000489045 TECTBQ96PL2 329 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 MS4A7Q9GZW8 240 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-213ENST00000489045 YY1AP1Q9H869 796 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 BRD7Q9NPI1 651 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 C14orf119Q9NWQ9 140 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 FAM53CQ9NYF3 392 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 ZNF319Q9P2F9 582 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 POMPQ9Y244 141 aa19.16■□□□□ 0.66
COL9A3-213ENST00000489045 TRAV40A0A0B4J280 105 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 HMGN1P05114 100 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 LYNP07948 512 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 ANXA8P13928 327 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 KLHL12Q53G59 568 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 RHOUQ7L0Q8 258 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 CPOQ8IVL8 374 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 GCSAMQ8N6F7 178 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 OR52H1Q8NGJ2 320 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 OR8S1Q8NH09 359 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 OTOSQ8NHW6 89 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 OR10A2Q9H208 303 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 DNAJB9Q9UBS3 223 aa19.15■□□□□ 0.66
COL9A3-213ENST00000489045 hCG_1807616A0A1W2PRN6 198 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 OOEPA6NGQ2 149 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 DNAJC9-AS1A6NH13 148 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 C22orf46C9J442 243 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 PRODHO43272 600 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 DNAJC8O75937 253 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-213ENST00000489045 WDR86Q86TI4 376 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 PAPD5Q8NDF8 572 aaKnown RBP19.14■□□□□ 0.65
COL9A3-213ENST00000489045 BBS1Q8NFJ9 593 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 THEM6Q8WUY1 208 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 PGAM5Q96HS1 289 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 DUX5Q96PT3 197 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 TRIM36Q9NQ86 728 aa19.14■□□□□ 0.65
COL9A3-213ENST00000489045 TRAV38-1A0A0B4J264 116 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 ADAM20O43506 726 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 PLATP00750 562 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 CFL1P23528 166 aaKnown RBP19.13■□□□□ 0.65
COL9A3-213ENST00000489045 NAA10P41227 235 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-213ENST00000489045 GSK3AP49840 483 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 NPY4RP50391 375 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 TMEM236Q5W0B7 351 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-213ENST00000489045 ZNF454Q8N9F8 522 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 C1orf147Q96MC9 270 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-213ENST00000489045 PPP1R3EQ9H7J1 279 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 SLC25A19Q9HC21 320 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 ERVK-18Q9QC07 812 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 KLHDC2Q9Y2U9 406 aa19.13■□□□□ 0.65
COL9A3-213ENST00000489045 SOX21Q9Y651 276 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-213ENST00000489045 TNFRSF13BO14836 293 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-213ENST00000489045 ENSAO43768 121 aaKnown RBP19.12■□□□□ 0.65
COL9A3-213ENST00000489045 GYPAP02724 150 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 EGR1P18146 543 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 PRTN3P24158 256 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 FGF12P61328 243 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 RPS7P62081 194 aaKnown RBP19.12■□□□□ 0.65
COL9A3-213ENST00000489045 BAMBIQ13145 260 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 SLC35D3Q5M8T2 416 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 C9orf139Q6ZV77 190 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 FAM90A1Q86YD7 464 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 C3orf56Q8N813 242 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 PAPOLGQ9BWT3 736 aaKnown RBP19.12■□□□□ 0.65
COL9A3-213ENST00000489045 KIF17Q9P2E2 1029 aa19.12■□□□□ 0.65
COL9A3-213ENST00000489045 NDUFA2O43678 99 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 LHBP01229 141 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 SLC2A5P22732 501 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 GNALP38405 381 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 C11orf53Q8IXP5 236 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 CSNK2A3Q8NEV1 391 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 RGCCQ9H4X1 137 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 SMURF1Q9HCE7 757 aa19.11■□□□□ 0.65
COL9A3-213ENST00000489045 RHBDD3Q9Y3P4 386 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms