RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 DESP17661 470 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 LAP3P28838 519 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 DDOSTP39656 456 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 CXCL5P42830 114 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 BPIFB3P59826 476 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 ACTA2P62736 377 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 ACTC1P68032 377 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 HMGCS1Q01581 520 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 PRPSAP1Q14558 356 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 TMEM249Q2WGJ8 235 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 SLC25A35Q3KQZ1 300 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 NUDCD3Q8IVD9 361 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 CD302Q8IX05 232 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 ARRDC1Q8N5I2 433 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 ACOT4Q8N9L9 421 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 PATE1Q8WXA2 126 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 SYAP1Q96A49 352 aaPredicted RBP2.55□□□□□ -2
ITGB1-214ENST00000488427 TIMD4Q96H15 378 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 SMIM10Q96HG1 83 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 FBXO44Q9H4M3 255 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 IL37Q9NZH6 218 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 TIMM10BQ9Y5J6 103 aa2.55□□□□□ -2
ITGB1-214ENST00000488427 NINQ8N4C6 2090 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 SCN3AQ9NY46 2000 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 KIAA1549Q9HCM3 1950 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 PRSS37A4D1T9 235 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 C9J4A7 227 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 SCAMP2O15127 329 aaKnown RBP2.54□□□□□ -2
ITGB1-214ENST00000488427 MAGEB3O15480 346 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 ANGPTL7O43827 346 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 SUPT3HO75486 399 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 LYPLA2O95372 231 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 C6orf47O95873 294 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 ALDOBP05062 364 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 FGF1P05230 155 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 RBMY1A1P0DJD3 496 aaKnown RBP2.54□□□□□ -2
ITGB1-214ENST00000488427 CCNB1P14635 433 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 NPR2P20594 1047 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 HSD17B2P37059 387 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 CD86P42081 329 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 OR5I1Q13606 314 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 GNMTQ14749 295 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 NCF4Q15080 339 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 ZBED5Q49AG3 693 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 C5orf47Q569G3 176 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 WDR59Q6PJI9 974 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 ABHD12BQ7Z5M8 362 aaPredicted RBP2.54□□□□□ -2
ITGB1-214ENST00000488427 SLC13A5Q86YT5 568 aaPredicted RBP2.54□□□□□ -2
ITGB1-214ENST00000488427 ITPRIPQ8IWB1 547 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 CCL4L1Q8NHW4 92 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 ZNF721Q8TF20 911 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 PYROXD1Q8WU10 500 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 CCDC12Q8WUD4 166 aaPredicted RBP2.54□□□□□ -2
ITGB1-214ENST00000488427 KIFAP3Q92845 792 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 C9orf72Q96LT7 481 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 LINC00477Q96M19 166 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 RPRD1AQ96P16 312 aaPredicted RBP2.54□□□□□ -2
ITGB1-214ENST00000488427 NPAS2Q99743 824 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 SPIN2AQ99865 258 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 SPIN2BQ9BPZ2 258 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 SLC39A3Q9BRY0 314 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 CTPS2Q9NRF8 586 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 CLCF1Q9UBD9 225 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 FADS3Q9Y5Q0 445 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 HERC1Q15751 4861 aa2.54□□□□□ -2
ITGB1-214ENST00000488427 TTC41PQ6P2S7 1318 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 ARHGEF35A5YM69 484 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 OR5B21A6NL26 309 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 C11orf94C9JXX5 98 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 K7EPI3 171 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 K7EQM0 130 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 MGRN1O60291 552 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 ALOX12BO75342 701 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 OPN1MWP04001 364 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CTSLP07711 333 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 UQCRHP07919 91 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CSF3P09919 207 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 GKN3PP0CG01 181 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 OPN1MW2P0DN77 364 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 OPN1MW3P0DN78 364 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 ZNF30P17039 623 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 TCN1P20061 433 aaPredicted RBP2.53□□□□□ -2
ITGB1-214ENST00000488427 SLC2A5P22732 501 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CCR1P32246 355 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 SRP14P37108 136 aaKnown RBP2.53□□□□□ -2
ITGB1-214ENST00000488427 PMELP40967 661 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 GRIA1P42261 906 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CASP4P49662 377 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 GFERP55789 205 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 POLR2FP61218 127 aaKnown RBP2.53□□□□□ -2
ITGB1-214ENST00000488427 IRF4Q15306 451 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 EXOC3L2Q2M3D2 409 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CARD16Q5EG05 197 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 OR2G6Q5TZ20 316 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 KCTD16Q68DU8 428 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 C12orf56Q8IXR9 622 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 LRRC52Q8N7C0 313 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CYB561D1Q8N8Q1 229 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 IPMKQ8NFU5 416 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms