RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 OR2AG1Q9H205 316 aa2.73□□□□□ -1.97
SMC4-218ENST00000486711 TDRD3Q9H7E2 651 aaKnown RBP2.73□□□□□ -1.97
SMC4-218ENST00000486711 RHBDL2Q9NX52 303 aa2.73□□□□□ -1.97
SMC4-218ENST00000486711 UBIAD1Q9Y5Z9 338 aa2.73□□□□□ -1.97
SMC4-218ENST00000486711 COMMD3-BMI1R4GMX3 469 aa2.73□□□□□ -1.97
SMC4-218ENST00000486711 PTPRTO14522 1441 aa2.73□□□□□ -1.97
SMC4-218ENST00000486711 A0A1W2PRF3 423 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 A0A1W2PRM7 423 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 ZNF207O43670 478 aaKnown RBP2.72□□□□□ -1.97
SMC4-218ENST00000486711 GLSO94925 669 aaPredicted RBP2.72□□□□□ -1.97
SMC4-218ENST00000486711 LCA5LO95447 670 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 OTCP00480 354 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 DCNP07585 359 aaKnown RBP2.72□□□□□ -1.97
SMC4-218ENST00000486711 OR2B8PP59922 312 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 PITPNAQ00169 270 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 NAB1Q13506 487 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 OR2T5Q6IEZ7 315 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 SHISA6Q6ZSJ9 500 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 FBXO36Q8NEA4 188 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 TTLQ8NG68 377 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 OR52K1Q8NGK4 314 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 OR2T29Q8NH02 315 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 OR52P1PQ8NH57 321 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 TCP10LQ8TDR4 215 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 RXFP4Q8TDU9 374 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 ZNF707Q96C28 371 aaPredicted RBP2.72□□□□□ -1.97
SMC4-218ENST00000486711 RBBP8Q99708 897 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 ARMC7Q9H6L4 198 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 REEP1Q9H902 201 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 EXOSC4Q9NPD3 245 aaKnown RBP2.72□□□□□ -1.97
SMC4-218ENST00000486711 PRSS16Q9NQE7 514 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 OPN4Q9UHM6 478 aa2.72□□□□□ -1.97
SMC4-218ENST00000486711 ARPC4-TTLL3A0A0A6YYG9 625 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 A0A1W2PPV4 95 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 C5orf63A6NC05 138 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CCNE2O96020 404 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 OXTP01178 125 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 IL4P05112 153 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 HOXB8P17481 243 aaPredicted RBP2.71□□□□□ -1.98
SMC4-218ENST00000486711 ME2P23368 584 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CD70P32970 193 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 ARL2P36404 184 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 KIR3DL2P43630 455 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CCNG1P51959 295 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 TAS2R39P59534 338 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 YIF1BQ5BJH7 314 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CAVIN4Q5BKX8 364 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 THOC7Q6I9Y2 204 aaKnown RBP2.71□□□□□ -1.98
SMC4-218ENST00000486711 ZNF880Q6PDB4 577 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CD300LGQ6UXG3 332 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 SLC35D2Q76EJ3 337 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 NDUFAF7Q7L592 441 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 OR2W3Q7Z3T1 314 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 SLC30A8Q8IWU4 369 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CDS1Q92903 461 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 NEURL3Q96EH8 262 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 KCNS3Q9BQ31 491 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 EMC6Q9BV81 110 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 SAMD10Q9BYL1 202 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 LZTFL1Q9NQ48 299 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 CES1P1Q9UKY3 287 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 FLVCR2Q9UPI3 526 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 SLIT3O75094 1523 aa2.71□□□□□ -1.98
SMC4-218ENST00000486711 TRAV40A0A0B4J280 105 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 IGHV7-4-1A0A0J9YVY3 117 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 A0A0J9YYE9 177 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 CENPVL3A0A0U1RRI6 287 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 LOC100653049A0A140TA62 436 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 A0A1B0GUH1 482 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 OR5H1A6NKK0 313 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 UPK1BO75841 260 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 GATBO75879 557 aaKnown RBP2.7□□□□□ -1.98
SMC4-218ENST00000486711 CCNKO75909 580 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 KRT34O76011 436 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 SNAI1O95863 264 aaPredicted RBP2.7□□□□□ -1.98
SMC4-218ENST00000486711 TGM6O95932 706 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 TRBC1P01850 177 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 HLA-DQB1P01920 261 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 MT-ND4P03905 459 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 CD74P04233 296 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 KLK1P06870 262 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 STAG3L2P0CL84 134 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 HSPD1P10809 573 aaKnown RBP2.7□□□□□ -1.98
SMC4-218ENST00000486711 APLNRP35414 380 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 CFHR2P36980 270 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 SIGLEC14Q08ET2 396 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 NKAIN1Q4KMZ8 207 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 OPN5Q6U736 354 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 LINC00336Q6ZUF6 198 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 ARHGAP18Q8N392 663 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 WDR31Q8NA23 367 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 NECAP1Q8NC96 275 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 OR6K6Q8NGW6 343 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 SLC25A46Q96AG3 418 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 RDH12Q96NR8 316 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 RNF5Q99942 180 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 FBXO44Q9H4M3 255 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 FBXO6Q9NRD1 293 aaPredicted RBP2.7□□□□□ -1.98
SMC4-218ENST00000486711 C8orf17Q9NRJ1 99 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms