RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SNAI2O43623 268 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 TIMM8AO60220 97 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 KIAA0513O60268 411 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 RAMP1O60894 148 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 PIAS1O75925 651 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 PSMG1O95456 288 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 IFNA5P01569 189 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 PPBPP02775 128 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 SMIM6P0DI80 62 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 SPP1P10451 314 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ZP3P21754 424 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 UQCRC2P22695 453 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 IER3P46695 156 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 YAP1P46937 504 aaKnown RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 MTNR1AP48039 350 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 NPBWR2P48146 333 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 COMPP49747 757 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 MEOX2P50222 304 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ERVK-25P63136 954 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 EGR4Q05215 589 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 DUSP2Q05923 314 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 CD69Q07108 199 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 RIPPLY1Q0D2K3 151 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF155Q12901 538 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 DLG1Q12959 904 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 GAGE1Q13065 139 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ALKBH1Q13686 389 aaKnown RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 TRAM2Q15035 370 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ZIK1Q3SY52 487 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 C6orf226Q5I0X4 101 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 MEDAGQ5VYS4 303 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 HBMQ6B0K9 141 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 NIPAL3Q6P499 406 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 FAM159AQ6UWV7 190 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 CD300LDQ6UXZ3 194 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 TFAP2EQ6VUC0 442 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 USP43Q70EL4 1123 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 CYS1Q717R9 158 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 GALNT10Q86SR1 603 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 MARCH3Q86UD3 253 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 P2RY8Q86VZ1 359 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 MEX3DQ86XN8 651 aaKnown RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 IFT20Q8IY31 132 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 C1orf87Q8N0U7 546 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 FBXL14Q8N1E6 418 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 RIBC1Q8N443 379 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF525Q8N782 197 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 C11orf44Q8N8P7 122 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 OR4N2Q8NGD1 307 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 OR9G4Q8NGQ1 327 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 C10orf105Q8TEF2 133 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ZMYND19Q96E35 227 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 HARBI1Q96MB7 349 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 KLHDC3Q9BQ90 382 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ACTRT3Q9BYD9 372 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 NMUR2Q9GZQ4 415 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 C3orf14Q9HBI5 128 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 Q9N2J8 555 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 MYNNQ9NPC7 610 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 KRCC1Q9NPI7 259 aaPredicted RBP5.88□□□□□ -1.47
HDAC3-209ENST00000486618 POU2F3Q9UKI9 436 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 VDAC3Q9Y277 283 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 NUBP2Q9Y5Y2 271 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 PTGDR2Q9Y5Y4 395 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 USH1CQ9Y6N9 552 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 ARFGEF3Q5TH69 2177 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 ANK2Q01484 3957 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 IGLV3-32A0A0A0MS00 114 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CXorf49A8MYA2 514 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 H7C417 338 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 RFXANKO14593 260 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 TNFSF11O14788 317 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 SCGNO76038 276 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CST1P01037 141 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 AMY1AP04745 511 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CD1AP06126 327 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CHRM4P08173 479 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 RBP1P09455 135 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 DAOP14920 347 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 SSTR1P30872 391 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 KDELR2P33947 212 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 RCVRNP35243 200 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 ID1P41134 155 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 AQP2P41181 271 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 MAGEA12P43365 314 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 IDH2P48735 452 aaKnown RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 EFNA4P52798 201 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CTXN1P60606 82 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 ELF3P78545 371 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 SSBP2P81877 361 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 PSG6Q00889 435 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CKAP4Q07065 602 aaKnown RBP5.87□□□□□ -1.47
HDAC3-209ENST00000486618 HNF4GQ14541 408 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 SLC36A2Q495M3 483 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 TIMM23BQ5SRD1 257 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 CPTPQ5TA50 214 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 ASCL4Q6XD76 172 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 Q6ZSR9 355 aa5.87□□□□□ -1.47
HDAC3-209ENST00000486618 IL17RELQ6ZVW7 336 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms