RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 TMEM269A0A1B0GVZ9 245 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 A0A1W2PQL4 384 aaPredicted RBP22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 ATP6V1E1P36543 226 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 MTNR1AP48039 350 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 CLDND2Q8NHS1 167 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 RNFT2Q96EX2 444 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 Q96MT0 163 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 ADAT1Q9BUB4 502 aaKnown RBP22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 RAB26Q9ULW5 256 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 WIPI2Q9Y4P8 454 aa22.39■■□□□ 1.17
GTF3C4-202ENST00000483873 SRSF10O75494 262 aaKnown RBP22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 PNPP00491 289 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 OR2T7P0C7T2 308 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 ZNF16P17020 682 aaPredicted RBP22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 DCTDP32321 178 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 GSK3AP49840 483 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 OR8G1Q15617 311 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 LAIR2Q6ISS4 152 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 THAP5Q7Z6K1 395 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 OR2T27Q8NH04 317 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 ZNF420Q8TAQ5 688 aaPredicted RBP22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 FBLIM1Q8WUP2 373 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 PPP1R14AQ96A00 147 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 GCM1Q9NP62 436 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 AMBNQ9NP70 447 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 MRPL15Q9P015 296 aaKnown RBP22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 PPP1R3CQ9UQK1 317 aa22.38■■□□□ 1.17
GTF3C4-202ENST00000483873 FN1P02751 2386 aaKnown RBP22.37■■□□□ 1.17
GTF3C4-202ENST00000483873 SRP9P49458 86 aaKnown RBP22.37■■□□□ 1.17
GTF3C4-202ENST00000483873 ZNF91Q05481 1191 aa22.37■■□□□ 1.17
GTF3C4-202ENST00000483873 EGR3Q06889 387 aa22.37■■□□□ 1.17
GTF3C4-202ENST00000483873 MAB21L1Q13394 359 aa22.37■■□□□ 1.17
GTF3C4-202ENST00000483873 TMEM106BQ9NUM4 274 aa22.37■■□□□ 1.17
GTF3C4-202ENST00000483873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 DBTP11182 482 aaKnown RBP22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 MYF6P23409 242 aa22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 CFL1P23528 166 aaKnown RBP22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 HIVEP2P31629 2446 aa22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 MMP16P51512 607 aa22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 ZNF829Q3KNS6 432 aaPredicted RBP22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 NIPBLQ6KC79 2804 aaeCLIP22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 MSI2Q96DH6 328 aaKnown RBP22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 PBOV1Q9GZY1 135 aa22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 RGCCQ9H4X1 137 aa22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 PPP1R3EQ9H7J1 279 aa22.36■■□□□ 1.17
GTF3C4-202ENST00000483873 SNTNA6NMZ2 147 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 ACKR3P25106 362 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 DDOSTP39656 456 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 GZMKP49863 264 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 ZNF85Q03923 595 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 OR8B8Q15620 311 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 ZNF684Q5T5D7 378 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 PRAMEF6Q5VXH4 476 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 CYB5R2Q6BCY4 276 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 MOGAT3Q86VF5 341 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 SIGLEC11Q96RL6 698 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 SLC22A4Q9H015 551 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 YAE1D1Q9NRH1 226 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 GTF2A1LQ9UNN4 478 aa22.35■■□□□ 1.17
GTF3C4-202ENST00000483873 INAFM1C9JVW0 142 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 J3QRE1 110 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 CD200P41217 278 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 SLC3A1Q07837 685 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 YIPF7Q8N8F6 280 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 RAB1CQ92928 201 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 TIMD4Q96H15 378 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 NUFIP1Q9UHK0 495 aaKnown RBP22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 R4GMQ9 66 aa22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 SONP18583 2426 aaKnown RBP22.34■■□□□ 1.17
GTF3C4-202ENST00000483873 ACOD1A6NK06 481 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 ANKRD30BLA7E2S9 258 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 LOC110117498-PIK3R3F6TDL0 507 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 GMDSO60547 372 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 RPP14O95059 124 aaKnown RBP22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 KRT8P05787 483 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 PMELP40967 661 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 LGALS12Q96DT0 336 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 CNBD2Q96M20 576 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 G6PC2Q9NQR9 355 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 RHBDD3Q9Y3P4 386 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 NPTNQ9Y639 398 aa22.33■■□□□ 1.17
GTF3C4-202ENST00000483873 A0A0U1RQV5 110 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 TTRP02766 147 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 LMO4P61968 165 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 MPPED2Q15777 294 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 OR51E1Q8TCB6 317 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 HPS1Q92902 700 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 GPR84Q9NQS5 396 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 UFSP2Q9NUQ7 469 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 EXOGQ9Y2C4 368 aaKnown RBP22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 NOP16Q9Y3C1 178 aaKnown RBP22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 RPL36Q9Y3U8 105 aaKnown RBP22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 PCDHGB5Q9Y5G0 923 aa22.32■■□□□ 1.16
GTF3C4-202ENST00000483873 LOC100289279A0A1B0GTE1 492 aa22.31■■□□□ 1.16
GTF3C4-202ENST00000483873 ISPDA4D126 451 aa22.31■■□□□ 1.16
GTF3C4-202ENST00000483873 METTL15A6NJ78 407 aa22.31■■□□□ 1.16
GTF3C4-202ENST00000483873 TMEM178BH3BS89 294 aa22.31■■□□□ 1.16
GTF3C4-202ENST00000483873 CYB5R3P00387 301 aaPredicted RBP22.31■■□□□ 1.16
GTF3C4-202ENST00000483873 IGLV3-1P01715 115 aa22.31■■□□□ 1.16
GTF3C4-202ENST00000483873 IGHV2-70P01814 119 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms