RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.54
VARS-225ENST00000482996 PMELP40967 661 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 FAM3AP98173 230 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 GFOD2Q3B7J2 385 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 KDM4DQ6B0I6 523 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 KCTD18Q6PI47 426 aaPredicted RBP11.65□□□□□ -0.54
VARS-225ENST00000482996 NLRC3Q7RTR2 1065 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 KRT77Q7Z794 578 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 OR8S1Q8NH09 359 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 SGK3Q96BR1 496 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 TEAD3Q99594 435 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 C7orf69Q9H7B7 122 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 RNPEPL1Q9HAU8 725 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 S100A14Q9HCY8 104 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 C14orf119Q9NWQ9 140 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 H2AFY2Q9P0M6 372 aaPredicted RBP11.65□□□□□ -0.54
VARS-225ENST00000482996 RNF7Q9UBF6 113 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 OR5V1Q9UGF6 321 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 LRCH1Q9Y2L9 728 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 TMEM14AQ9Y6G1 99 aa11.65□□□□□ -0.54
VARS-225ENST00000482996 ARHGAP32A7KAX9 2087 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 A8MXK9 166 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 PRKYO43930 277 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 PTBP3O95758 552 aaKnown RBP11.64□□□□□ -0.55
VARS-225ENST00000482996 WNT2P09544 360 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 ALOX5APP20292 161 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 GNALP38405 381 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
VARS-225ENST00000482996 MPPED2Q15777 294 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 KCNJ8Q15842 424 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 ZNF404Q494X3 552 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 SLX4IPQ5VYV7 408 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 LRRN1Q6UXK5 716 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 PRSS45Q7RTY3 260 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 C1QL2Q7Z5L3 287 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 PHC2Q8IXK0 858 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 FTMTQ8N4E7 242 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 CSNK2A3Q8NEV1 391 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 NANPQ8TBE9 248 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 DVL3Q92997 716 aaPredicted RBP11.64□□□□□ -0.55
VARS-225ENST00000482996 NEIL1Q96FI4 390 aaPredicted RBP11.64□□□□□ -0.55
VARS-225ENST00000482996 CENPNQ96H22 339 aaPredicted RBP11.64□□□□□ -0.55
VARS-225ENST00000482996 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 TMEM246Q9BRR3 403 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 ZNF391Q9UJN7 358 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 KLHDC2Q9Y2U9 406 aa11.64□□□□□ -0.55
VARS-225ENST00000482996 POLR3KQ9Y2Y1 108 aaPredicted RBP11.64□□□□□ -0.55
VARS-225ENST00000482996 A0A0A6YYJ9 748 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 hCG_38984A0A1B0GV85 526 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 CCDC182A6NF36 153 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 A6NLC8 198 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 ZAR1LA6NP61 321 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 AVPP01185 164 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 GRPP07492 148 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 MRPL3P09001 348 aaKnown RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 EPHA1P21709 976 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 GSK3AP49840 483 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 SEC61A1P61619 476 aaKnown RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 FAM201AQ5SY85 155 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 DCDC5Q6ZRR9 648 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 MEPCEQ7L2J0 689 aaKnown RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 TCEANCQ8N8B7 351 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 TMEM163Q8TC26 289 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 ZNF418Q8TF45 676 aaPredicted RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 ASB17Q8WXJ9 295 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 CNN2Q99439 309 aaKnown RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
VARS-225ENST00000482996 OSBPL10Q9BXB5 764 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 MROQ9BYG7 248 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 SEMA6AQ9H2E6 1030 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 VCX3BQ9H321 246 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 TRIM36Q9NQ86 728 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 C1orf123Q9NWV4 160 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 LRP12Q9Y561 859 aa11.63□□□□□ -0.55
VARS-225ENST00000482996 hCG_1807616A0A1W2PRN6 198 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 ACOD1A6NK06 481 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 SLC22A31A6NKX4 558 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 LGALS8O00214 317 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 ZNF254O75437 659 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 ADRA2CP18825 462 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 EPHA2P29317 976 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 PITPNBP48739 271 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 HCCSP53701 268 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 GNB2P62879 340 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 NXNL2Q5VZ03 156 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 C12orf73Q69YU5 71 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 GID4Q8IVV7 300 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 BOLLQ8N9W6 283 aaKnown RBP11.62□□□□□ -0.55
VARS-225ENST00000482996 DEFB108BQ8NET1 73 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 CIB1Q99828 191 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 MICU1Q9BPX6 476 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 MRI1Q9BV20 369 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 PAPOLGQ9BWT3 736 aaKnown RBP11.62□□□□□ -0.55
VARS-225ENST00000482996 ABCB9Q9NP78 766 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 MMP26Q9NRE1 261 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 ZNF319Q9P2F9 582 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms