RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 AANATQ16613 207 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 NHLRC3Q5JS37 347 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 GALNTL5Q7Z4T8 443 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 GABRG1Q8N1C3 465 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 MUC20Q8N307 709 aaPredicted RBP12.72□□□□□ -0.37
CHD3-211ENST00000481999 OR2M7Q8NG81 312 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 TNFAIP8L1Q8WVP5 186 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 ASB13Q8WXK3 278 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 ADAT3Q96EY9 351 aaPredicted RBP12.72□□□□□ -0.37
CHD3-211ENST00000481999 SLC6A15Q9H2J7 730 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 EXO5Q9H790 373 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 CEP295Q9C0D2 2601 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 PIEZO1Q92508 2521 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 OR5H15A6NDH6 313 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 F5H5P2 479 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 MELTFP08582 738 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 DBHP09172 617 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 GABRA1P14867 456 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 WT1P19544 449 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 ACHEP22303 614 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 H2BFSP57053 126 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 IDO2Q6ZQW0 420 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 OR8S1Q8NH09 359 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 FGGYQ96C11 551 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 PBOV1Q9GZY1 135 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 A0A0A6YYH2 397 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 A6NJ64 397 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 NKX2-8O15522 239 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 ISG15P05161 165 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 S100A11P31949 105 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 GFRA1P56159 465 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 ZNF121P58317 390 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 C4orf46Q504U0 113 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 ZNF704Q6ZNC4 412 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 ZNF627Q7L945 461 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 CDH26Q8IXH8 852 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 TMEM229BQ8NBD8 167 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 CCDC107Q8WV48 283 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 WDR89Q96FK6 387 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 NARFLQ9H6Q4 476 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 ZNF703Q9H7S9 590 aaPredicted RBP12.71□□□□□ -0.37
CHD3-211ENST00000481999 TMEM138Q9NPI0 162 aa12.71□□□□□ -0.37
CHD3-211ENST00000481999 SMG1Q96Q15 3661 aaKnown RBP12.71□□□□□ -0.38
CHD3-211ENST00000481999 GOSR2O14653 212 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ZNF35P13682 527 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ABOP16442 354 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 CNR1P21554 472 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 HSD11B1P28845 292 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 RAC3P60763 192 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 DEGS2Q6QHC5 323 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 DVL3Q92997 716 aaPredicted RBP12.7□□□□□ -0.38
CHD3-211ENST00000481999 NABP1Q96AH0 204 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ADGRG7Q96K78 797 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 SLC25A21Q9BQT8 299 aaPredicted RBP12.7□□□□□ -0.38
CHD3-211ENST00000481999 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
CHD3-211ENST00000481999 CRLF2Q9HC73 371 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 FLVCR1Q9Y5Y0 555 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ZNF716A6NP11 495 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 B8ZZF3 427 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 F5H5K5 113 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ARPC5O15511 151 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 EIF1BO60739 113 aaKnown RBP12.7□□□□□ -0.38
CHD3-211ENST00000481999 SIX6O95475 246 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 RAB3DO95716 219 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 GNALP38405 381 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 MMP16P51512 607 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 CAPZA1P52907 286 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 GMFBP60983 142 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 C2orf68Q2NKX9 166 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 CHMP1BQ7LBR1 199 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 JAGN1Q8N5M9 183 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 OR8B12Q8NGG6 310 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 PTX4Q96A99 478 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 TTTY12Q9BZ98 90 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ULBP2Q9BZM5 246 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 RDH8Q9NYR8 311 aa12.7□□□□□ -0.38
CHD3-211ENST00000481999 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
CHD3-211ENST00000481999 FOXD3Q9UJU5 478 aaPredicted RBP12.7□□□□□ -0.38
CHD3-211ENST00000481999 LOC102725191A0A1B0GVB3 256 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 RP2O75695 350 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 ZNF250P15622 560 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 ENDOGQ14249 297 aaKnown RBP12.69□□□□□ -0.38
CHD3-211ENST00000481999 HLXQ14774 488 aaPredicted RBP12.69□□□□□ -0.38
CHD3-211ENST00000481999 TAF13Q15543 124 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 TMEM244Q5VVB8 128 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 FAM57BQ71RH2 274 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 ABHD12BQ7Z5M8 362 aaPredicted RBP12.69□□□□□ -0.38
CHD3-211ENST00000481999 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 NKAIN3Q8N8D7 197 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 FBXO17Q96EF6 278 aa12.69□□□□□ -0.38
CHD3-211ENST00000481999 FAM71F1Q96KD3 344 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms