RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 MYL12AP19105 171 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 CCL8P80075 99 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 TNK1Q13470 666 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 TSTQ16762 297 aaKnown RBP16.77■□□□□ 0.28
LIME1-205ENST00000480139 Q6ZSR3 168 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 KRT74Q7RTS7 529 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 KLBQ86Z14 1044 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 ZNF786Q8N393 782 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 ZNF525Q8N782 197 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 PLPP7Q8NBV4 271 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 WFDC11Q8NEX6 87 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 OR2Z1Q8NG97 314 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 OR51E1Q8TCB6 317 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 UBASH3BQ8TF42 649 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 RDH5Q92781 318 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 Q9H521 79 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 SAP30LQ9HAJ7 183 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 GPR84Q9NQS5 396 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 GTF2A1LQ9UNN4 478 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 CAB39Q9Y376 341 aaPredicted RBP16.77■□□□□ 0.28
LIME1-205ENST00000480139 TANC2Q9HCD6 1990 aa16.77■□□□□ 0.27
LIME1-205ENST00000480139 MLNRO43193 412 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 GMDSO60547 372 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 CCL1P22362 96 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 PDLIM4P50479 330 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 ETV1P50549 477 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 CCR9P51686 369 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 TNFAIP6P98066 277 aaPredicted RBP16.76■□□□□ 0.27
LIME1-205ENST00000480139 WDR38Q5JTN6 314 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 TMPRSS11AQ6ZMR5 421 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 AHSA2Q719I0 299 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 PRSS35Q8N3Z0 413 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 OR2G2Q8NGZ5 317 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 PPP1R14AQ96A00 147 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 Q96MF0 132 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 ISG20L2Q9H9L3 353 aaKnown RBP16.76■□□□□ 0.27
LIME1-205ENST00000480139 CHCHD3Q9NX63 227 aaKnown RBP16.76■□□□□ 0.27
LIME1-205ENST00000480139 SCN3BQ9NY72 215 aa16.76■□□□□ 0.27
LIME1-205ENST00000480139 MAP1AP78559 2803 aaPredicted RBP16.76■□□□□ 0.27
LIME1-205ENST00000480139 DHRS7CA6NNS2 312 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 ANKRD30BLA7E2S9 258 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 DENRO43583 198 aaKnown RBP16.75■□□□□ 0.27
LIME1-205ENST00000480139 MTRF1O75570 445 aaKnown RBP16.75■□□□□ 0.27
LIME1-205ENST00000480139 DHRS3O75911 302 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 HTR1AP08908 422 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 UBCP0CG48 685 aaKnown RBP16.75■□□□□ 0.27
LIME1-205ENST00000480139 ACHEP22303 614 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 PSMB10P40306 273 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 CRYBB2P43320 205 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 MAP2K3P46734 347 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 TGM4P49221 684 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 ZBTB37Q5TC79 503 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 RNLSQ5VYX0 342 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 TGIF2LYQ8IUE0 185 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 STX19Q8N4C7 294 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 KLHL36Q8N4N3 616 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 CELF2-AS1Q8N7Q2 184 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 SPERTQ8NA61 448 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 ZNF540Q8NDQ6 660 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 CCDC54Q8NEL0 328 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 OR10AD1Q8NGE0 317 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 OR52N1Q8NH53 320 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 C10orf105Q8TEF2 133 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 FAM168AQ92567 244 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 CNBD2Q96M20 576 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 DLL4Q9NR61 685 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 SLC22A13Q9Y226 551 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 TPRKBQ9Y3C4 175 aa16.75■□□□□ 0.27
LIME1-205ENST00000480139 A0A1B0GTI1 187 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 TPD52L2O43399 206 aaKnown RBP16.74■□□□□ 0.27
LIME1-205ENST00000480139 CST4P01036 141 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 TNFRSF1AP19438 455 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 CA6P23280 308 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 ACKR3P25106 362 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 GIFP27352 417 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 CD200P41217 278 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 KIR3DL2P43630 455 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 SRP9P49458 86 aaKnown RBP16.74■□□□□ 0.27
LIME1-205ENST00000480139 SLC35A2P78381 396 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 MVKQ03426 396 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 DOK3Q7L591 496 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 COMMD2Q86X83 199 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 SEMA6DQ8NFY4 1073 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 MYDGFQ969H8 173 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 OR2V2Q96R30 315 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 SOX7Q9BT81 388 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 ADAT1Q9BUB4 502 aaKnown RBP16.74■□□□□ 0.27
LIME1-205ENST00000480139 ABCB9Q9NP78 766 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 FRRS1LQ9P0K9 344 aa16.74■□□□□ 0.27
LIME1-205ENST00000480139 IGHV1-69-2A0A0G2JMI3 117 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 H0YL77 283 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 RP2O75695 350 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 ISG15P05161 165 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 CDK1P06493 297 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 RPSAP08865 295 aaKnown RBP16.73■□□□□ 0.27
LIME1-205ENST00000480139 GBX2P52951 348 aaPredicted RBP16.73■□□□□ 0.27
LIME1-205ENST00000480139 NANOS3P60323 173 aaKnown RBP16.73■□□□□ 0.27
LIME1-205ENST00000480139 OR8G1Q15617 311 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 CCDC58Q4VC31 144 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 FAM71F1Q96KD3 344 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms