RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SP140LQ9H930 580 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 SCN3BQ9NY72 215 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 TREM2Q9NZC2 230 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 CAB39Q9Y376 341 aaPredicted RBP13.5□□□□□ -0.25
COPS3-207ENST00000477299 RHBDD3Q9Y3P4 386 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 LRRC42Q9Y546 428 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 A0A0U1RQV5 110 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 OR4C45A6NMZ5 311 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 MYL12AP19105 171 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 MAP2K4P45985 399 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 CDH15P55291 814 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 ACTA2P62736 377 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 ACTG2P63267 376 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 CSNK2BP67870 215 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 IRF3Q14653 427 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 OR8B8Q15620 311 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 NANOGP1Q8N7R0 232 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 OR2Z1Q8NG97 314 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 OR5M11Q96RB7 305 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 SLC30A2Q9BRI3 323 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 MS4A5Q9H3V2 200 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 Q9H521 79 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 TPRKBQ9Y3C4 175 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 CACNG2Q9Y698 323 aa13.49□□□□□ -0.25
COPS3-207ENST00000477299 PLSCR5A0PG75 271 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 F5H5P2 479 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 F12P00748 615 aaPredicted RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 MT-ND5P03915 603 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 MED21Q13503 144 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 ALKBH1Q13686 389 aaKnown RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 RBM48Q5RL73 367 aaKnown RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 COMMD2Q86X83 199 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 PLPP7Q8NBV4 271 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 OR51A4Q8NGJ6 313 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 MYDGFQ969H8 173 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 YIPF5Q969M3 257 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 PDCD1LG2Q9BQ51 273 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 CDCA4Q9BXL8 241 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 FGF23Q9GZV9 251 aaPredicted RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 RAB1BQ9H0U4 201 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 TMEM100Q9NV29 134 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 DCAF16Q9NXF7 216 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 BABAM2Q9NXR7 383 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 GPR160Q9UJ42 338 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 EDARQ9UNE0 448 aa13.48□□□□□ -0.25
COPS3-207ENST00000477299 LSM2Q9Y333 95 aaKnown RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 YLPM1P49750 1951 aaKnown RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 MAP1AP78559 2803 aaPredicted RBP13.48□□□□□ -0.25
COPS3-207ENST00000477299 RGS10O43665 173 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 CDC14BO60729 498 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 BMP4P12644 408 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 FAHP16930 419 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 EFNA4P52798 201 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 GBX2P52951 348 aaPredicted RBP13.47□□□□□ -0.25
COPS3-207ENST00000477299 MOGQ16653 247 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 TMPRSS11AQ6ZMR5 421 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 ZNF525Q8N782 197 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 OR52N1Q8NH53 320 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 RGP1Q92546 391 aaPredicted RBP13.47□□□□□ -0.25
COPS3-207ENST00000477299 ELMOD3Q96FG2 381 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
COPS3-207ENST00000477299 CCDC90BQ9GZT6 254 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 RGCCQ9H4X1 137 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 MOB1AQ9H8S9 216 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 CHCHD3Q9NX63 227 aaKnown RBP13.47□□□□□ -0.25
COPS3-207ENST00000477299 PIGLQ9Y2B2 252 aa13.47□□□□□ -0.25
COPS3-207ENST00000477299 CR1P17927 2039 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 PNMA8CA0A1B0GUJ8 204 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 LOC107986453A0A1B0GWG9 222 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 A0A1B0GWJ7 208 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 ZNF850A8MQ14 1090 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 OGG1O15527 345 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 ZFPL1O95159 310 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 CCL1P22362 96 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 EEF1B2P24534 225 aaKnown RBP13.46□□□□□ -0.25
COPS3-207ENST00000477299 TNFAIP6P98066 277 aaPredicted RBP13.46□□□□□ -0.25
COPS3-207ENST00000477299 HOXA4Q00056 320 aaPredicted RBP13.46□□□□□ -0.25
COPS3-207ENST00000477299 MAB21L1Q13394 359 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 Q5PR19 223 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 OR13C5Q8NGS8 318 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 OR13G1Q8NGZ3 307 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 PIGCQ92535 297 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 MRPL48Q96GC5 212 aaKnown RBP13.46□□□□□ -0.25
COPS3-207ENST00000477299 FOXC2Q99958 501 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 V9GYS6 101 aa13.46□□□□□ -0.25
COPS3-207ENST00000477299 TRBV2A0A0J9YWF9 115 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 LOC100289279A0A1B0GTE1 492 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 TPD52L2O43399 206 aaKnown RBP13.45□□□□□ -0.26
COPS3-207ENST00000477299 ADH4P08319 380 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 DAOP14920 347 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 PMELP40967 661 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 MAP2K3P46734 347 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 TGM4P49221 684 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 CCR9P51686 369 aa13.45□□□□□ -0.26
COPS3-207ENST00000477299 WNT4P56705 351 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms