RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 OLFML2AQ68BL7 652 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 SMARCD3Q6STE5 483 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 GDPGP1Q6ZNW5 385 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 FAM122BQ7Z309 247 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 OR10AD1Q8NGE0 317 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 ZNF420Q8TAQ5 688 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-214ENST00000477152 Q8TCH9 128 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 SSMEM1Q8WWF3 244 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 RSRC1Q96IZ7 334 aaKnown RBP6.05□□□□□ -1.44
BRCA1-214ENST00000477152 OR14A2Q96R54 314 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 ATF6BQ99941 703 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 KCTD14Q9BQ13 255 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-214ENST00000477152 DPAGT1Q9H3H5 408 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 MMADHCQ9H3L0 296 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-214ENST00000477152 PRDM13Q9H4Q3 707 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 SAR1AQ9NR31 198 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 RNF7Q9UBF6 113 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 ADAM18Q9Y3Q7 739 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 IER3IP1Q9Y5U9 82 aa6.05□□□□□ -1.44
BRCA1-214ENST00000477152 CLPSL1A2RUU4 121 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 GGT3PA6NGU5 568 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 ZNF879B4DU55 563 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 RER1O15258 196 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 SERPINA1P01009 418 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 APOC1P02654 83 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 SEC61A1P61619 476 aaKnown RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 COX10Q12887 443 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 TAF13Q15543 124 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 OR8B8Q15620 311 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 WDR25Q64LD2 544 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 RPL13AP3Q6NVV1 102 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 Q6YL49 198 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 ZNF620Q6ZNG0 422 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 SCCPDHQ8NBX0 429 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 NPRL2Q8WTW4 380 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 DYRK2Q92630 601 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 ERMAPQ96PL5 475 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 C1QTNF5Q9BXJ0 243 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 NUAK2Q9H093 628 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 MMP27Q9H306 513 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 TMCC3Q9ULS5 477 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 SIGLEC7Q9Y286 467 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 FAM96BQ9Y3D0 163 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 ANK2Q01484 3957 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 F5H5K5 113 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 F5H5P2 479 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 LGALS8O00214 317 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 PTP4A3O75365 173 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 IGHV4-38-2P0DP08 117 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 DDOSTP39656 456 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 MDH1P40925 334 aaKnown RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 FGF12P61328 243 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 HIST1H3AP68431 136 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 HLXQ14774 488 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 MIDNQ504T8 468 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 TMEM255AQ5JRV8 349 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 HIST2H3PS2Q5TEC6 136 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 FIP1L1Q6UN15 594 aaKnown RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 HACD2Q6Y1H2 254 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 HIST2H3AQ71DI3 136 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 VTCN1Q7Z7D3 282 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 FTMTQ8N4E7 242 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 LINC00471Q8N535 108 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 FITM2Q8N6M3 262 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 BHLHE23Q8NDY6 225 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 OR52L1Q8NGH7 329 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 FANK1Q8TC84 345 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 RCN3Q96D15 328 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 CMTM5Q96DZ9 223 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 ZNF48Q96MX3 618 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 PCGF1Q9BSM1 259 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 NSRP1Q9H0G5 558 aaKnown RBP6.04□□□□□ -1.44
BRCA1-214ENST00000477152 B9D1Q9UPM9 204 aa6.04□□□□□ -1.44
BRCA1-214ENST00000477152 A0A0G2JK05 382 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 J3KTA2 159 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 CDC42EP2O14613 210 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 TNFRSF13BO14836 293 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 ARPC3O15145 178 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 MDKP21741 143 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 CFL1P23528 166 aaKnown RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 EEF1B2P24534 225 aaKnown RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 NAA10P41227 235 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 BLVRAP53004 296 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 PAX2Q02962 417 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 TRAP1Q12931 704 aaKnown RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 DEFB112Q30KQ8 113 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 RFX4Q33E94 735 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 HSP90B2PQ58FF3 399 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 SPRNQ5BIV9 151 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 TBPL2Q6SJ96 375 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 DRAM2Q6UX65 266 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 COLCA1Q6ZS62 124 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 TSEN54Q7Z6J9 526 aaKnown RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 CPLX4Q7Z7G2 160 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-214ENST00000477152 SLC15A3Q8IY34 581 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 OR2C3Q8N628 320 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 SLC7A13Q8TCU3 470 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 SLC7A6Q92536 515 aa6.03□□□□□ -1.44
BRCA1-214ENST00000477152 SLCO4A1Q96BD0 722 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms