RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TMEM52BQ4KMG9 183 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 FAM182BQ5T319 152 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C1QL3Q5VWW1 255 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF385CQ66K41 422 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 ARL9Q6T311 187 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TMPRSS12Q86WS5 348 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 STX12Q86Y82 276 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR5AS1Q8N127 324 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR51G1Q8NGK1 321 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 STT3BQ8TCJ2 826 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 HMGB4Q8WW32 186 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TMED6Q8WW62 240 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 RAB39BQ96DA2 213 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 BPIFA2Q96DR5 249 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 DTD2Q96FN9 168 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR8B4Q96RC9 309 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 DIRC2Q96SL1 478 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 GAS2L1Q99501 681 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 MED10Q9BTT4 135 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 RAB33BQ9H082 229 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 LPAR5Q9H1C0 372 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CALHM2Q9HA72 323 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CHMP1AQ9HD42 196 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 TM7SF3Q9NS93 570 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 MRPL15Q9P015 296 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 THAP10Q9P2Z0 257 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF346Q9UL40 294 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 RNF114Q9Y508 228 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 LOC100509620A0A075B734 347 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR6C6A6NF89 314 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C4orf47A7E2U8 309 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TSPAN6O43657 245 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TNFSF13O75888 250 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 RCBTB2O95199 551 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ADH1AP07327 375 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CTSBP07858 339 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 GRK4P32298 578 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 FLT3LGP49771 235 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 NOVA1P51513 510 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 HIST1H3AP68431 136 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TMEM187Q14656 261 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR7A5Q15622 319 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PSG3Q16557 428 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZSWIM7Q19AV6 140 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 C14orf28Q4W4Y0 310 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TP53I3Q53FA7 332 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 COL13A1Q5TAT6 717 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 HIST2H3PS2Q5TEC6 136 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PAPD4Q6PIY7 484 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 C16orf54Q6UWD8 224 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ADAMTSL4Q6UY14 1074 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF550Q7Z398 422 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 SAMD7Q7Z3H4 446 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ETFBKMTQ8IXQ9 262 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CFAP52Q8N1V2 620 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZNF619Q8N2I2 560 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 FAM71E2Q8N5Q1 922 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR1N1Q8NGS0 311 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR9A2Q8NGT5 310 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 OR2G3Q8NGZ4 309 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TMEM171Q8WVE6 324 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 MRPL24Q96A35 216 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 ZBTB8AQ96BR9 441 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 PRRT1Q99946 306 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 POTEKPQ9BYX7 375 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TMEM231Q9H6L2 316 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 KIR3DX1Q9H7L2 352 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 BEX1Q9HBH7 125 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 GLRX2Q9NS18 164 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 GFOD1Q9NXC2 390 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 CISD1Q9NZ45 108 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 ATXN7L1Q9ULK2 861 aaPredicted RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 PTRH2Q9Y3E5 179 aaKnown RBP3.6□□□□□ -1.83
USP16-205ENST00000474835 CBY1Q9Y3M2 126 aa3.6□□□□□ -1.83
USP16-205ENST00000474835 TGIF2-C20orf24A0A0A6YYL0 155 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 IGHV2-70DA0A0C4DH43 119 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 MTX2O75431 263 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 JTBO76095 146 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 BPNT1O95861 308 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 CISD3P0C7P0 127 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 BCKDHBP21953 392 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 IGFALSP35858 605 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 SERPINF1P36955 418 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 UCP3P55916 312 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 MTCP1P56278 107 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 TAS2R31P59538 309 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 NTHL1P78549 312 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 CYCSP99999 105 aaKnown RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.59□□□□□ -1.83
USP16-205ENST00000474835 SLC22A6Q4U2R8 563 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 RIPPLY2Q5TAB7 128 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 GPR157Q5UAW9 335 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 POMZP3Q6PJE2 187 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 SLC35D2Q76EJ3 337 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 ERN2Q76MJ5 926 aaKnown RBP3.59□□□□□ -1.83
USP16-205ENST00000474835 SSX9Q7RTT3 188 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 VN1R4Q7Z5H5 301 aa3.59□□□□□ -1.83
USP16-205ENST00000474835 MRGPRGQ86SM5 289 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms