RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CELA3AP09093 270 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 MPZP25189 248 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 HTR5AP47898 357 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 GZMKP49863 264 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 RIPPLY1Q0D2K3 151 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 UNC119Q13432 240 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 CNN3Q15417 329 aaKnown RBP19.04■□□□□ 0.64
CCM2-206ENST00000474617 PNLIPRP3Q17RR3 467 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 ZNF260Q3ZCT1 412 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 RTL6Q6ICC9 239 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 GLIPR1L1Q6UWM5 242 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 TMPRSS7Q7RTY8 843 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.04■□□□□ 0.64
CCM2-206ENST00000474617 PAQR4Q8N4S7 273 aaPredicted RBP19.04■□□□□ 0.64
CCM2-206ENST00000474617 OR56B1Q8NGI3 324 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 OR4C16Q8NGL9 310 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 OR10R2Q8NGX6 335 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 ZNF775Q96BV0 537 aaPredicted RBP19.04■□□□□ 0.64
CCM2-206ENST00000474617 HYLS1Q96M11 299 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 GPER1Q99527 375 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 RANBP3Q9H6Z4 567 aaPredicted RBP19.04■□□□□ 0.64
CCM2-206ENST00000474617 GLRX2Q9NS18 164 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 MRPL15Q9P015 296 aaKnown RBP19.04■□□□□ 0.64
CCM2-206ENST00000474617 ING4Q9UNL4 249 aa19.04■□□□□ 0.64
CCM2-206ENST00000474617 TRGV5A0A0B4J1U4 118 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 RGS13O14921 159 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 CD74P04233 296 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 MMP7P09237 267 aaPredicted RBP19.03■□□□□ 0.64
CCM2-206ENST00000474617 PSG4Q00888 419 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 SRYQ05066 204 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 GFOD2Q3B7J2 385 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 TSPO2Q5TGU0 170 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 ZNF774Q6NX45 483 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 ZNF584Q8IVC4 421 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 GABRG1Q8N1C3 465 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 STEAP2Q8NFT2 490 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 FYTTD1Q96QD9 318 aaKnown RBP19.03■□□□□ 0.64
CCM2-206ENST00000474617 ALX4Q9H161 411 aaPredicted RBP19.03■□□□□ 0.64
CCM2-206ENST00000474617 WNT5BQ9H1J7 359 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 LDAHQ9H6V9 325 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 SCP2D1Q9UJQ7 156 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 POU2F3Q9UKI9 436 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 PIGLQ9Y2B2 252 aa19.03■□□□□ 0.64
CCM2-206ENST00000474617 ZNF891A8MT65 544 aaPredicted RBP19.02■□□□□ 0.64
CCM2-206ENST00000474617 SULT1A3P0DMM9 295 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 SULT1A4P0DMN0 295 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 NAT2P11245 290 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 RFC3P40938 356 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 CBX5P45973 191 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 TNK1Q13470 666 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 KISS1Q15726 138 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 GLDNQ6ZMI3 551 aaPredicted RBP19.02■□□□□ 0.64
CCM2-206ENST00000474617 Q6ZTK2 550 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.02■□□□□ 0.64
CCM2-206ENST00000474617 SGK3Q96BR1 496 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 RNF170Q96K19 258 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 TMEM59Q9BXS4 323 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 TP63Q9H3D4 680 aaPredicted RBP19.02■□□□□ 0.64
CCM2-206ENST00000474617 KCNK15Q9H427 330 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.02■□□□□ 0.641e-6■■■■□ 24.6
CCM2-206ENST00000474617 NPDC1Q9NQX5 325 aaPredicted RBP19.02■□□□□ 0.64
CCM2-206ENST00000474617 ZNF224Q9NZL3 707 aa19.02■□□□□ 0.64
CCM2-206ENST00000474617 ZNF736B4DX44 427 aaPredicted RBP19.01■□□□□ 0.63
CCM2-206ENST00000474617 CREBL2O60519 120 aaPredicted RBP19.01■□□□□ 0.63
CCM2-206ENST00000474617 ARR3P36575 388 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 PTGFRP43088 359 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 PPA1Q15181 289 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 TGIF1Q15583 401 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 LINC00303Q3SY05 128 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 PRSS33Q8NF86 280 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 CCDC107Q8WV48 283 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 ASB13Q8WXK3 278 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 SLC39A7Q92504 469 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 REEP6Q96HR9 211 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 DMRTB1Q96MA1 342 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 S100A13Q99584 98 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 MYOZ1Q9NP98 299 aaPredicted RBP19.01■□□□□ 0.63
CCM2-206ENST00000474617 SLC2A8Q9NY64 477 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 CNTRLQ7Z7A1 2325 aa19.01■□□□□ 0.63
CCM2-206ENST00000474617 TRAV17A0A0B4J275 112 aa19■□□□□ 0.63
CCM2-206ENST00000474617 IGKV1-9A0A0C4DH69 117 aa19■□□□□ 0.63
CCM2-206ENST00000474617 A8MV72 311 aaPredicted RBP19■□□□□ 0.63
CCM2-206ENST00000474617 ARPC1BO15143 372 aaKnown RBP19■□□□□ 0.63
CCM2-206ENST00000474617 SSNA1O43805 119 aa19■□□□□ 0.63
CCM2-206ENST00000474617 CDC14BO60729 498 aa19■□□□□ 0.63
CCM2-206ENST00000474617 RAB3DO95716 219 aa19■□□□□ 0.63
CCM2-206ENST00000474617 LCATP04180 440 aa19■□□□□ 0.63
CCM2-206ENST00000474617 PTHLHP12272 177 aa19■□□□□ 0.63
CCM2-206ENST00000474617 FAPQ12884 760 aa19■□□□□ 0.63
CCM2-206ENST00000474617 CDK10Q15131 360 aa19■□□□□ 0.63
CCM2-206ENST00000474617 FCN2Q15485 313 aa19■□□□□ 0.63
CCM2-206ENST00000474617 NDUFA5Q16718 116 aa19■□□□□ 0.63
CCM2-206ENST00000474617 ACTBL2Q562R1 376 aa19■□□□□ 0.63
CCM2-206ENST00000474617 SKA3Q8IX90 412 aa19■□□□□ 0.63
CCM2-206ENST00000474617 TUSC5Q8IXB3 177 aa19■□□□□ 0.63
CCM2-206ENST00000474617 SPICQ8N5J4 248 aa19■□□□□ 0.63
CCM2-206ENST00000474617 FNDC9Q8TBE3 224 aa19■□□□□ 0.63
CCM2-206ENST00000474617 POM121Q96HA1 1249 aa19■□□□□ 0.63
CCM2-206ENST00000474617 C1orf147Q96MC9 270 aaPredicted RBP19■□□□□ 0.63
CCM2-206ENST00000474617 PRRT1Q99946 306 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms