RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 ERI1Q8IV48 349 aaKnown RBP15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 ADGRG5Q8IZF4 528 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 SPERTQ8NA61 448 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 OR6N2Q8NGY6 317 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 TEX47Q8TBZ9 253 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 CLPTM1LQ96KA5 538 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 INTS14Q96SY0 518 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 FEVQ99581 238 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 ABHD6Q9BV23 337 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 PRDM13Q9H4Q3 707 aa15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 PRPF19Q9UMS4 504 aaKnown RBP15.59■□□□□ 0.09
CCDC88B-206ENST00000473405 TRAV38-1A0A0B4J264 116 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 hCG_38984A0A1B0GV85 526 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 ARRDC5A6NEK1 342 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 A6NLC8 198 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 ACOT8O14734 319 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 TBX1O43435 398 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 ANXA2P07355 339 aaKnown RBP15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 GSTT1P30711 240 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 CFHR2P36980 270 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 OPRL1P41146 370 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 SLC15A1P46059 708 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 DEFB112Q30KQ8 113 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 KLHL12Q53G59 568 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 TMEM179BQ7Z7N9 219 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 TIGD4Q8IY51 512 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 SGK3Q96BR1 496 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 REEP6Q96HR9 211 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 PCGF1Q9BSM1 259 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 TOR3AQ9H497 397 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 PPP1R3EQ9H7J1 279 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 TRIM36Q9NQ86 728 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 DNAJC27Q9NZQ0 273 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 ZNF319Q9P2F9 582 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 ERVK-18Q9QC07 812 aa15.58■□□□□ 0.08
CCDC88B-206ENST00000473405 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 ANKRD30BLA7E2S9 258 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 ZNF879B4DU55 563 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 HOXA3O43365 443 aaPredicted RBP15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 GLCEO94923 617 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 GYPAP02724 150 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 HSD11B1P28845 292 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 DDOSTP39656 456 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 ZNF121P58317 390 aaPredicted RBP15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 GK3PQ14409 553 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 TIGD6Q17RP2 521 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 PRR31Q5SQ13 230 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 GPR157Q5UAW9 335 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 TEX36Q5VZQ5 186 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 CD276Q5ZPR3 534 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 RUSC1-AS1Q66K80 236 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 SHISA2Q6UWI4 295 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 C11orf53Q8IXP5 236 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 GIPC3Q8TF64 312 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 TBX15Q96SF7 602 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 CHID1Q9BWS9 393 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 RASSF4Q9H2L5 321 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 UNKLQ9H9P5 680 aaKnown RBP15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 C14orf119Q9NWQ9 140 aa15.57■□□□□ 0.08
CCDC88B-206ENST00000473405 IGHV3OR15-7A0A075B7D8 119 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 hCG_1807616A0A1W2PRN6 198 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 H3BN98 237 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 NDUFA2O43678 99 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 FAM107AO95990 144 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 CST1P01037 141 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 CSNK2BP67870 215 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 ELF3P78545 371 aaPredicted RBP15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 IL13RA1P78552 427 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 MZT1Q08AG7 82 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 FAM57BQ71RH2 274 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 RHOUQ7L0Q8 258 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 OR8S1Q8NH09 359 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 OTULINQ96BN8 352 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 SIRPDQ9H106 197 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 TAS2R1Q9NYW7 299 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 KAAG1Q9UBP8 84 aa15.56■□□□□ 0.08
CCDC88B-206ENST00000473405 A0A1B0GW55 424 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 SRRM5B3KS81 715 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DVL1O14640 695 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 TOX4O94842 621 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 LIPFP07098 398 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L2P0CJ85 424 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L3P0CJ86 424 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L4P0CJ87 422 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L5P0CJ88 424 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L6P0CJ89 424 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L7P0CJ90 424 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 GSK3AP49840 483 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 BPIFB3P59826 476 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 POU4F2Q12837 409 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 GFOD2Q3B7J2 385 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 DUX4L9Q6RFH8 374 aaPredicted RBP15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 WDR82Q6UXN9 313 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 FGFRL1Q8N441 504 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 CCDC197Q8NCU1 140 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 OR1M1Q8NGA1 313 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 OR52H1Q8NGJ2 320 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 LRGUKQ96M69 825 aa15.55■□□□□ 0.08
CCDC88B-206ENST00000473405 WDFY2Q96P53 400 aa15.55■□□□□ 0.08
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