RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PIGGQ5H8A4 983 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 KDM4DQ6B0I6 523 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 OR2T5Q6IEZ7 315 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 ZNF544Q6NX49 715 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 SPSB3Q6PJ21 355 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 CLEC18BQ6UXF7 455 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 GCNT7Q6ZNI0 430 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 ZNF589Q86UQ0 364 aaPredicted RBP2.03□□□□□ -2.09
XRN1-210ENST00000472697 VKORC1L1Q8N0U8 176 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 ZADH2Q8N4Q0 377 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 OR5M1Q8NGP8 315 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 OR10R2Q8NGX6 335 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 OR2T29Q8NH02 315 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 RNF138Q8WVD3 245 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 APH1BQ8WW43 257 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 SGTBQ96EQ0 304 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 C9orf72Q96LT7 481 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 SORCS2Q96PQ0 1159 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 SH3GL1Q99961 368 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 EXOSC3Q9NQT5 275 aaKnown RBP2.03□□□□□ -2.09
XRN1-210ENST00000472697 TAS2R13Q9NYV9 303 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 CALYQ9NYX4 217 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 MTFP1Q9UDX5 166 aa2.03□□□□□ -2.09
XRN1-210ENST00000472697 FAM208BQ5VWN6 2430 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ATG2AQ2TAZ0 1938 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 FOCADQ5VW36 1801 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 PATJQ8NI35 1801 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 KIAA1671Q9BY89 1806 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 IGHV1OR15-1A0A075B7D0 117 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 LOC730098B7Z3J9 87 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 NTN3O00634 580 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 PLPP3O14495 311 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 SOCS3O14543 225 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 HAT1O14929 419 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 MRPS12O15235 138 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 SGCEO43556 437 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TRAF3IP2O43734 574 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 MPZL2O60487 215 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 RPS17P08708 135 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 TRIM49P0CI25 452 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TRIM49CP0CI26 452 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 G0S2P27469 103 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 GPR6P46095 362 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 YAP1P46937 504 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 DNASE1L1P49184 302 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 MAP3K7CLP57077 242 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ERVK-16P61578 105 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 RPS21P63220 83 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 CSNK1G2P78368 415 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ZNF92Q03936 586 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ORC2Q13416 577 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 RAB31Q13636 194 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 UAP1Q16222 522 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 ATP6V1FQ16864 119 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TMEM30BQ3MIR4 351 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TPRG1LQ5T0D9 272 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 BSPRYQ5W0U4 402 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 DUPD1Q68J44 220 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ZNF343Q6P1L6 599 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 GATSQ8NAP1 163 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 VN1R2Q8NFZ6 395 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 OR51G1Q8NGK1 321 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 SDR42E1Q8WUS8 393 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 B3GALT6Q96L58 329 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 C9orf85Q96MD7 179 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 FOXN4Q96NZ1 517 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TMEM204Q9BSN7 226 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 COPS4Q9BT78 406 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 NSRP1Q9H0G5 558 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 SRMSQ9H3Y6 488 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 FGF22Q9HCT0 170 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 KCNIP1Q9NZI2 227 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 CLCF1Q9UBD9 225 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TMCO1Q9UM00 188 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 GTF3C1Q12789 2109 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 RAI1Q7Z5J4 1906 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 ZNFX1Q9P2E3 1918 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 GSTTP1A0A1W2PQM5 241 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 SLC17A2O00624 439 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 KMOO15229 486 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TOX3O15405 576 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 IGKV2-30P06310 120 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ELK3P41970 407 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 FABP6P51161 128 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 BLVRAP53004 296 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ATP12AP54707 1039 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 FGF8P55075 233 aaPredicted RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 ACTBP60709 375 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ACTG1P63261 375 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 UBE2IP63279 158 aaKnown RBP2.02□□□□□ -2.09
XRN1-210ENST00000472697 CLVS2Q5SYC1 327 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 CLEC6AQ6EIG7 209 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 SPESP1Q6UW49 350 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TMPRSS11AQ6ZMR5 421 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 Q6ZT83 130 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 NRMQ8IXM6 262 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 ZNF786Q8N393 782 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TRPV1Q8NER1 839 aa2.02□□□□□ -2.09
XRN1-210ENST00000472697 TFB1MQ8WVM0 346 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms