RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 NIPSNAP1Q9BPW8 284 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 ZNF319Q9P2F9 582 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 BAIAP2Q9UQB8 552 aa20.27■□□□□ 0.84
PTCH1-210ENST00000468211 SAMHD1Q9Y3Z3 626 aaKnown RBP20.27■□□□□ 0.84
PTCH1-210ENST00000468211 CMYA5Q8N3K9 4069 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 A0A1B0GW55 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 hCG_1807616A0A1W2PRN6 198 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 FAM181BA6NEQ2 426 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 POM121CA8CG34 1229 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 XRCC2O43543 280 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 TOX4O94842 621 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L2P0CJ85 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L3P0CJ86 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L4P0CJ87 422 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L5P0CJ88 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L6P0CJ89 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L7P0CJ90 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4L9Q6RFH8 374 aaPredicted RBP20.26■□□□□ 0.83
PTCH1-210ENST00000468211 Q6YL49 198 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 PRSS45Q7RTY3 260 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DPY19L4Q7Z388 723 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 IQCF1Q8N6M8 205 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 WDFY2Q96P53 400 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 ABHD6Q9BV23 337 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 SIRPDQ9H106 197 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 DUX4Q9UBX2 424 aa20.26■□□□□ 0.83
PTCH1-210ENST00000468211 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.25■□□□□ 0.83
PTCH1-210ENST00000468211 P2RY10O00398 339 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 DVL1O14640 695 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 ANXA2P07355 339 aaKnown RBP20.25■□□□□ 0.83
PTCH1-210ENST00000468211 KLHL12Q53G59 568 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 DHFR2Q86XF0 187 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 OR6N2Q8NGY6 317 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 SEH1LQ96EE3 360 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 CHIAQ9BZP6 476 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 OPA3Q9H6K4 179 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 REEP1Q9H902 201 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 C14orf119Q9NWQ9 140 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 DNAJC27Q9NZQ0 273 aa20.25■□□□□ 0.83
PTCH1-210ENST00000468211 RIIAD1A6NNX1 92 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 NDUFA2O43678 99 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 LIPFP07098 398 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 MELTFP08582 738 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 DDOSTP39656 456 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 BPIFB3P59826 476 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 GRB2P62993 217 aaKnown RBP20.24■□□□□ 0.83
PTCH1-210ENST00000468211 CSNK2BP67870 215 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 RELBQ01201 579 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 SRSF4Q08170 494 aaKnown RBP20.24■□□□□ 0.83
PTCH1-210ENST00000468211 TRIM25Q14258 630 aaKnown RBP20.24■□□□□ 0.83
PTCH1-210ENST00000468211 TEX36Q5VZQ5 186 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 FIP1L1Q6UN15 594 aaKnown RBP20.24■□□□□ 0.83
PTCH1-210ENST00000468211 FAM57BQ71RH2 274 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 BTN2A1Q7KYR7 527 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 ERI1Q8IV48 349 aaKnown RBP20.24■□□□□ 0.83
PTCH1-210ENST00000468211 OR8S1Q8NH09 359 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 RNF133Q8WVZ7 376 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 REEP6Q96HR9 211 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 SLITRK2Q9H156 845 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 TRIM36Q9NQ86 728 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 CMC2Q9NRP2 79 aa20.24■□□□□ 0.83
PTCH1-210ENST00000468211 hCG_38984A0A1B0GV85 526 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 ANKRD30BLA7E2S9 258 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.23■□□□□ 0.83
PTCH1-210ENST00000468211 IFNGP01579 166 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 ZNF3P17036 446 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 SLC15A1P46059 708 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 MNAT1P51948 309 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 ZNF121P58317 390 aaPredicted RBP20.23■□□□□ 0.83
PTCH1-210ENST00000468211 ARF6P62330 175 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 TIGD6Q17RP2 521 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 PNLDC1Q8NA58 520 aaKnown RBP20.23■□□□□ 0.83
PTCH1-210ENST00000468211 OR10G2Q8NGC3 310 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 LRRC29Q8WV35 223 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 NSL1Q96IY1 281 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 INTS14Q96SY0 518 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 NOX4Q9NPH5 578 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 BRD7Q9NPI1 651 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 KAAG1Q9UBP8 84 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 MMP24Q9Y5R2 645 aa20.23■□□□□ 0.83
PTCH1-210ENST00000468211 HSD11B1P28845 292 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 GSK3AP49840 483 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 BLVRAP53004 296 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 MZT1Q08AG7 82 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 METTL11BQ5VVY1 283 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 WDR82Q6UXN9 313 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 CD300LDQ6UXZ3 194 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 OR1M1Q8NGA1 313 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 LHX4Q969G2 390 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 OTULINQ96BN8 352 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 FEVQ99581 238 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 CCL13Q99616 98 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 MUC13Q9H3R2 512 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 TOR3AQ9H497 397 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 RHBDD3Q9Y3P4 386 aa20.22■□□□□ 0.83
PTCH1-210ENST00000468211 IGHV1-69DA0A0B4J2H0 117 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 IGHV1-69P01742 117 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 GSTT1P30711 240 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 OPRL1P41146 370 aa20.21■□□□□ 0.83
PTCH1-210ENST00000468211 GFOD2Q3B7J2 385 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms