RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SPATA24Q86W54 205 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 AQP12AQ8IXF9 295 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 IZUMO1Q8IYV9 350 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC37A3Q8NCC5 494 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 PAPD5Q8NDF8 572 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC26A10Q8NG04 563 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 OR10G2Q8NGC3 310 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 OR1J1Q8NGS3 322 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 KLF14Q8TD94 323 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 PRR25Q96S07 402 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 AMELYQ99218 206 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 DPCDQ9BVM2 203 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 RBM4Q9BWF3 364 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TSSK6Q9BXA6 273 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 BPESC1Q9GZL8 116 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 RACGAP1Q9H0H5 632 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 WDR76Q9H967 626 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CDH20Q9HBT6 801 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 PNRC2Q9NPJ4 139 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TBC1D23Q9NUY8 699 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TREM2Q9NZC2 230 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 STX18Q9P2W9 335 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 CYB5R1Q9UHQ9 305 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 KLHL21Q9UJP4 597 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
EXOSC3-204ENST00000465860 ANK2Q01484 3957 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 TENM1Q9UKZ4 2725 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 C12orf71A8MTZ7 269 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 C17orf100A8MU93 164 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 H0YL77 283 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 M0R233 179 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 AHCYL1O43865 530 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 RP2O75695 350 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 IGHV1-46P01743 117 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 SELEP16581 610 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 SPI1P17947 270 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 GIFP27352 417 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 EVX1P49640 407 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 GDI2P50395 445 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PDLIM4P50479 330 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 HCCSP53701 268 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 KLF3P57682 345 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PPP1CBP62140 327 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 LSM6P62312 80 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 LOXL1Q08397 574 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 COX10Q12887 443 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PSG7Q13046 419 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 AQP6Q13520 282 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 GGTLC2Q14390 218 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 TSTQ16762 297 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF260Q3ZCT1 412 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 DNAL1Q4LDG9 190 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 LINC01590Q5TEZ4 76 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 CLEC2AQ6UVW9 174 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 IL17RELQ6ZVW7 336 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 ASRGL1Q7L266 308 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 BCDIN3DQ7Z5W3 292 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 DPPA2Q7Z7J5 298 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF786Q8N393 782 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 BBS1Q8NFJ9 593 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 OR1F12Q8NHA8 337 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PRSS3P2Q8NHM4 247 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 SYNPRQ8TBG9 265 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 GIPC3Q8TF64 312 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 LRTOMTQ8WZ04 291 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PTP4A1Q93096 173 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 MSI2Q96DH6 328 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 C4orf45Q96LM5 186 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 LRGUKQ96M69 825 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 RHNO1Q9BSD3 238 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 LRMDAQ9H2I8 198 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 KCNN2Q9H2S1 579 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 C1orf198Q9H425 327 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 NARFLQ9H6Q4 476 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 REEP1Q9H902 201 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 MOV10Q9HCE1 1003 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 DYNLRB1Q9NP97 96 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF275Q9NSD4 429 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PLEK2Q9NYT0 353 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 PDP1Q9P0J1 537 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 GRIP1Q9Y3R0 1128 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 COMMD3-BMI1R4GMX3 469 aa4.05□□□□□ -1.76
EXOSC3-204ENST00000465860 DOCK11Q5JSL3 2073 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 STAB1Q9NY15 2570 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 IGHV3-64DA0A0J9YX35 117 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 A0A1W2PPW3 197 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 LOC390937A0A1W2PQ73 354 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 ARRDC5A6NEK1 342 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PRR32B1ATL7 298 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 FAM157AC9JC47 383 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 H3BNX3 289 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 GNGT2O14610 69 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 SPRY3O43610 288 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 IDH3BO43837 385 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 CD5LO43866 347 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 ATP5HO75947 161 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 RENP00797 406 aa4.04□□□□□ -1.76
EXOSC3-204ENST00000465860 PTHP01270 115 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms