RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 ABHD6Q9BV23 337 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 TEX12Q9BXU0 123 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 OR10A2Q9H208 303 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 OR51V1Q9H2C8 321 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 C1orf123Q9NWV4 160 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 KIF17Q9P2E2 1029 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 TRAV38-1A0A0B4J264 116 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 hCG_38984A0A1B0GV85 526 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 OOEPA6NGQ2 149 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 PRODHO43272 600 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 GRPP07492 148 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 LYNP07948 512 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 H2BFMP0C1H6 154 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 PSMB10P40306 273 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 MTNR1AP48039 350 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 ZNF121P58317 390 aaPredicted RBP11.63□□□□□ -0.55
USP4-206ENST00000461553 GINS1Q14691 196 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 KLHL12Q53G59 568 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 SFRP4Q6FHJ7 346 aaPredicted RBP11.63□□□□□ -0.55
USP4-206ENST00000461553 PLBD1Q6P4A8 553 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 LYPD2Q6UXB3 125 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 FTMTQ8N4E7 242 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 DACT3Q96B18 629 aaPredicted RBP11.63□□□□□ -0.55
USP4-206ENST00000461553 MARCH7Q9H992 704 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 ERVK-18Q9QC07 812 aa11.63□□□□□ -0.55
USP4-206ENST00000461553 ADAM20O43506 726 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 SELENOFO60613 162 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 HMGN1P05114 100 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 OSMP13725 252 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 ANXA8P13928 327 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 PRTN3P24158 256 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 GNALP38405 381 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 OPRL1P41146 370 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 RPS7P62081 194 aaKnown RBP11.62□□□□□ -0.55
USP4-206ENST00000461553 CBX1P83916 185 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 FAM3AP98173 230 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 HOXA4Q00056 320 aaPredicted RBP11.62□□□□□ -0.55
USP4-206ENST00000461553 BAMBIQ13145 260 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 SNCBQ16143 134 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 AWAT1Q58HT5 328 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 C9orf139Q6ZV77 190 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 RHOUQ7L0Q8 258 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 TMEM179BQ7Z7N9 219 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.62□□□□□ -0.55
USP4-206ENST00000461553 TIGD4Q8IY51 512 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 HS3ST5Q8IZT8 346 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 BCL6BQ8N143 479 aaPredicted RBP11.62□□□□□ -0.55
USP4-206ENST00000461553 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 CSNK2A3Q8NEV1 391 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 OTOSQ8NHW6 89 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 BCAS4Q8TDM0 211 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 PGAM5Q96HS1 289 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 DUX5Q96PT3 197 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 AMELYQ99218 206 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 PAPOLGQ9BWT3 736 aaKnown RBP11.62□□□□□ -0.55
USP4-206ENST00000461553 RGCCQ9H4X1 137 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 BRD7Q9NPI1 651 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 CTSZQ9UBR2 303 aa11.62□□□□□ -0.55
USP4-206ENST00000461553 KIR2DS1A0A191URI9 304 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 ANXA2P2A6NMY6 339 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 C22orf46C9J442 243 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 NDUFA2O43678 99 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 FKBP6O75344 327 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 TIPRLO75663 272 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 PLATP00750 562 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 NAA10P41227 235 aaPredicted RBP11.61□□□□□ -0.55
USP4-206ENST00000461553 PSMA6P60900 246 aaKnown RBP11.61□□□□□ -0.55
USP4-206ENST00000461553 FGF12P61328 243 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 SLC35D3Q5M8T2 416 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 GPR157Q5UAW9 335 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 CD276Q5ZPR3 534 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 ZNF841Q6ZN19 808 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 ZNF826PQ6ZT77 177 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 GCSAMQ8N6F7 178 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 DNAJC9Q8WXX5 260 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 SLC25A28Q96A46 364 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 ZNF48Q96MX3 618 aaPredicted RBP11.61□□□□□ -0.55
USP4-206ENST00000461553 DNAJB9Q9UBS3 223 aa11.61□□□□□ -0.55
USP4-206ENST00000461553 TCRBV3S1A0A5B6 114 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 DNAJC8O75937 253 aaPredicted RBP11.6□□□□□ -0.55
USP4-206ENST00000461553 GYPAP02724 150 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 GSK3AP49840 483 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 LCN1P1Q5VSP4 162 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 PRSS45Q7RTY3 260 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 FAM90A1Q86YD7 464 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 CPOQ8IVL8 374 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 PNLDC1Q8NA58 520 aaKnown RBP11.6□□□□□ -0.55
USP4-206ENST00000461553 THEM6Q8WUY1 208 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 LRRC29Q8WV35 223 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 SGK3Q96BR1 496 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 MICU1Q9BPX6 476 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 PCGF1Q9BSM1 259 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 PRRG3Q9BZD7 231 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 SLC25A19Q9HC21 320 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 ABCB9Q9NP78 766 aa11.6□□□□□ -0.55
USP4-206ENST00000461553 TMPRSS2O15393 492 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms