RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 KLHDC2Q9Y2U9 406 aa15.8■□□□□ 0.12
COL5A1-203ENST00000460264 IGHV2-70DA0A0C4DH43 119 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-203ENST00000460264 ANKRD30BLA7E2S9 258 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 CFL1P23528 166 aaKnown RBP15.79■□□□□ 0.12
COL5A1-203ENST00000460264 CD80P33681 288 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 PAX8Q06710 450 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 KLF17Q5JT82 389 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-203ENST00000460264 LYPD2Q6UXB3 125 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 PARP8Q8N3A8 854 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 THEM6Q8WUY1 208 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 C22orf15Q8WYQ4 148 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 JMJD8Q96S16 334 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 TEX12Q9BXU0 123 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 OR10A2Q9H208 303 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 BRD7Q9NPI1 651 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 C14orf119Q9NWQ9 140 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 CLN8Q9UBY8 286 aa15.79■□□□□ 0.12
COL5A1-203ENST00000460264 A6NLC8 198 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 LGALS8O00214 317 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 PHYHO14832 338 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 GRPP07492 148 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 FPR2P25090 351 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 PSMB10P40306 273 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 DAPP51397 102 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 CRISP1P54107 249 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 RPS7P62081 194 aaKnown RBP15.78■□□□□ 0.12
COL5A1-203ENST00000460264 MZT1Q08AG7 82 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 TUSC1Q2TAM9 212 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 GFOD2Q3B7J2 385 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 ZNF826PQ6ZT77 177 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 BOLLQ8N9W6 283 aaKnown RBP15.78■□□□□ 0.12
COL5A1-203ENST00000460264 PGAM5Q96HS1 289 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 ESM1Q9NQ30 184 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 C1orf123Q9NWV4 160 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 NUP50Q9UKX7 468 aa15.78■□□□□ 0.12
COL5A1-203ENST00000460264 TRIM77I1YAP6 450 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 GSK3AP49840 483 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 PSMA6P60900 246 aaKnown RBP15.77■□□□□ 0.12
COL5A1-203ENST00000460264 APOFQ13790 326 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 OR8B8Q15620 311 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 KCNJ8Q15842 424 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 ATP6AP1Q15904 470 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 SNAPC1Q16533 368 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 WDR25Q64LD2 544 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-203ENST00000460264 SFRP4Q6FHJ7 346 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-203ENST00000460264 BTNL3Q6UXE8 466 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 LRRN1Q6UXK5 716 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 ZNF841Q6ZN19 808 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 WDR86Q86TI4 376 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-203ENST00000460264 OR8S1Q8NH09 359 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 OR5K1Q8NHB7 308 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 FAM216AQ8WUB2 273 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 RAB40AQ8WXH6 277 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 MMADHCQ9H3L0 296 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-203ENST00000460264 RGCCQ9H4X1 137 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 TVP23BQ9NYZ1 205 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 CTSZQ9UBR2 303 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 ZNF69Q9UC07 566 aa15.77■□□□□ 0.12
COL5A1-203ENST00000460264 hCG_1807616A0A1W2PRN6 198 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 CCDC182A6NF36 153 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 C3orf80F5H4A9 247 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 PPIAL4GP0DN37 164 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 ALOX5APP20292 161 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 RASSF2P50749 326 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 GCSAMQ8N6F7 178 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 CSNK2A3Q8NEV1 391 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 PAPOLGQ9BWT3 736 aaKnown RBP15.76■□□□□ 0.11
COL5A1-203ENST00000460264 YIPF3Q9GZM5 350 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 PPP1R3EQ9H7J1 279 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 TRIM36Q9NQ86 728 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 LAMP5Q9UJQ1 280 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 RHBDD3Q9Y3P4 386 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 LRP12Q9Y561 859 aa15.76■□□□□ 0.11
COL5A1-203ENST00000460264 TRAV38-1A0A0B4J264 116 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 KIR2DS1A0A191URI9 304 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 OOEPA6NGQ2 149 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 C22orf46C9J442 243 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 ESRRGP62508 458 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 ACTG1P63261 375 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 PTGES3Q15185 160 aaKnown RBP15.75■□□□□ 0.11
COL5A1-203ENST00000460264 SIGLECL1Q8N7X8 197 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 ZDHHC22Q8N966 263 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 UPRTQ96BW1 309 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 TEAD3Q99594 435 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 NUDT16L1Q9BRJ7 211 aaKnown RBP15.75■□□□□ 0.11
COL5A1-203ENST00000460264 NIPAL2Q9H841 368 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 KRT84Q9NSB2 600 aa15.75■□□□□ 0.11
COL5A1-203ENST00000460264 TNFRSF13BO14836 293 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-203ENST00000460264 PRKYO43930 277 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 MITFO75030 526 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-203ENST00000460264 ATP5HO75947 161 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 LHBP01229 141 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 IGHV4-38-2P0DP08 117 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 EGR1P18146 543 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 ACKR3P25106 362 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 GNALP38405 381 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 HCCSP53701 268 aa15.74■□□□□ 0.11
COL5A1-203ENST00000460264 C1orf146Q5VVC0 180 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms