RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 VENTXO95231 258 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 CFL1P23528 166 aaKnown RBP13.78□□□□□ -0.2
SHANK2-213ENST00000460048 HCCSP53701 268 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 HOXA4Q00056 320 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-213ENST00000460048 ZNF154Q13106 437 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 LYPD2Q6UXB3 125 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 LRRN1Q6UXK5 716 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 DCDC5Q6ZRR9 648 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 ASRGL1Q7L266 308 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 AMIGO2Q86SJ2 522 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-213ENST00000460048 SEMA6DQ8NFY4 1073 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 LRTOMTQ8WZ04 291 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 DACT3Q96B18 629 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-213ENST00000460048 PGAM5Q96HS1 289 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-213ENST00000460048 YIPF3Q9GZM5 350 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 OR10A2Q9H208 303 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 RGCCQ9H4X1 137 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 BRD7Q9NPI1 651 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 KRT84Q9NSB2 600 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 RNF7Q9UBF6 113 aa13.78□□□□□ -0.2
SHANK2-213ENST00000460048 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-213ENST00000460048 ZAR1LA6NP61 321 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 ANKRD30BLA7E2S9 258 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 FCGR1AP12314 374 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 EPHA2P29317 976 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 GSK3AP49840 483 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 PSMA6P60900 246 aaKnown RBP13.77□□□□□ -0.21
SHANK2-213ENST00000460048 MZT1Q08AG7 82 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 OR8B8Q15620 311 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 SLX4IPQ5VYV7 408 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 C12orf73Q69YU5 71 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 USP43Q70EL4 1123 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 ZDHHC13Q8IUH4 622 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 C19orf18Q8NEA5 215 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 NIPAL2Q9H841 368 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 C14orf119Q9NWQ9 140 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 OR5V1Q9UGF6 321 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 LAMP5Q9UJQ1 280 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 LRP12Q9Y561 859 aa13.77□□□□□ -0.21
SHANK2-213ENST00000460048 TNFRSF13BO14836 293 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-213ENST00000460048 GRPP07492 148 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 PSMB10P40306 273 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 GNB2P62879 340 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 PAX8Q06710 450 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 TUSC1Q2TAM9 212 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 LCN1P1Q5VSP4 162 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 AADACL4Q5VUY2 407 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 DEGS2Q6QHC5 323 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 ZNF841Q6ZN19 808 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 ZNF826PQ6ZT77 177 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 KRT77Q7Z794 578 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 WDR86Q86TI4 376 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 C11orf53Q8IXP5 236 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 GCSAMQ8N6F7 178 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 CSNK2A3Q8NEV1 391 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 ZNF418Q8TF45 676 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-213ENST00000460048 LYZL4Q96KX0 146 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 OR8B2Q96RD0 313 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 PRRG3Q9BZD7 231 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 PPP1R3EQ9H7J1 279 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 C1orf123Q9NWV4 160 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 AUP1Q9Y679 476 aa13.76□□□□□ -0.21
SHANK2-213ENST00000460048 PRR32B1ATL7 298 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 M0R129 80 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 LGALS8O00214 317 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 LHBP01229 141 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 MRPL3P09001 348 aaKnown RBP13.75□□□□□ -0.21
SHANK2-213ENST00000460048 ACKR3P25106 362 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 CD80P33681 288 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 PITPNBP48739 271 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 HILS1P60008 231 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 GFOD2Q3B7J2 385 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 KLF17Q5JT82 389 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-213ENST00000460048 NXNL2Q5VZ03 156 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 KCTD18Q6PI47 426 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-213ENST00000460048 MEPCEQ7L2J0 689 aaKnown RBP13.75□□□□□ -0.21
SHANK2-213ENST00000460048 NLRC3Q7RTR2 1065 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 BCDIN3DQ7Z5W3 292 aaKnown RBP13.75□□□□□ -0.21
SHANK2-213ENST00000460048 TCEANCQ8N8B7 351 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 OR8B12Q8NGG6 310 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 OR8S1Q8NH09 359 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 TMEM163Q8TC26 289 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 ZFAND2BQ8WV99 257 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 MRI1Q9BV20 369 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 COPS3Q9UNS2 423 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 RHBDD3Q9Y3P4 386 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 STAB1Q9NY15 2570 aa13.75□□□□□ -0.21
SHANK2-213ENST00000460048 IGHV2-70DA0A0C4DH43 119 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 ACOD1A6NK06 481 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 A6NLC8 198 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 CIB2O75838 187 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 DCTDP32321 178 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 ROM1Q03395 351 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 SNCBQ16143 134 aa13.74□□□□□ -0.21
SHANK2-213ENST00000460048 WDR25Q64LD2 544 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-213ENST00000460048 SFRP4Q6FHJ7 346 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-213ENST00000460048 KRT74Q7RTS7 529 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms