RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PRR23D2P0DMB1 279 aaPredicted RBP10.75□□□□□ -0.69
CHD3-206ENST00000452447 CFL1P23528 166 aaKnown RBP10.75□□□□□ -0.69
CHD3-206ENST00000452447 PSMB10P40306 273 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 NPY4RP50391 375 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 BNIP1Q12981 228 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 GINS1Q14691 196 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 FAM57BQ71RH2 274 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 RHOUQ7L0Q8 258 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 SLC16A9Q7RTY1 509 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 SPATA24Q86W54 205 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.75□□□□□ -0.69
CHD3-206ENST00000452447 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
CHD3-206ENST00000452447 RNF133Q8WVZ7 376 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 SPSB4Q96A44 273 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 UPRTQ96BW1 309 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 REEP6Q96HR9 211 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 TECTBQ96PL2 329 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 ERVK-18Q9QC07 812 aa10.75□□□□□ -0.69
CHD3-206ENST00000452447 IGHV3OR16-10A0A075B7F0 116 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 TRAV38-1A0A0B4J264 116 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 LGALS8O00214 317 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 NDUFA2O43678 99 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 HMGN1P05114 100 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 H2BFMP0C1H6 154 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 PRTN3P24158 256 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 MTNR1AP48039 350 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 FAM3AP98173 230 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 BAMBIQ13145 260 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 FLOT2Q14254 428 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 GFOD2Q3B7J2 385 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 KLHL12Q53G59 568 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 CD276Q5ZPR3 534 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 PLBD1Q6P4A8 553 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 TMEM179BQ7Z7N9 219 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 FTMTQ8N4E7 242 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 SGK3Q96BR1 496 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 ZMYND19Q96E35 227 aaPredicted RBP10.74□□□□□ -0.69
CHD3-206ENST00000452447 DUX5Q96PT3 197 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 TEX12Q9BXU0 123 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 OR10A2Q9H208 303 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 MARCH7Q9H992 704 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 ZMAT3Q9HA38 289 aaKnown RBP10.74□□□□□ -0.69
CHD3-206ENST00000452447 BRD7Q9NPI1 651 aa10.74□□□□□ -0.69
CHD3-206ENST00000452447 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 OOEPA6NGQ2 149 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ADAM20O43506 726 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ENSAO43768 121 aaKnown RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 LYNP07948 512 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 IGHV4-38-2P0DP08 117 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 OSMP13725 252 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ANXA8P13928 327 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 GNALP38405 381 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ZNF121P58317 390 aaPredicted RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 HOXA4Q00056 320 aaPredicted RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 ZNF841Q6ZN19 808 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ZNF826PQ6ZT77 177 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 TIGD4Q8IY51 512 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 THEM6Q8WUY1 208 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 SLC25A28Q96A46 364 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 DACT3Q96B18 629 aaPredicted RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 PGAM5Q96HS1 289 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 DNAJC9-AS1A6NH13 148 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 PRODHO43272 600 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 LIPFP07098 398 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 PRKACGP22612 351 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 OPRL1P41146 370 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 FGF12P61328 243 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 RPS7P62081 194 aaKnown RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 FOXL1Q12952 345 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 SNCBQ16143 134 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 HS3ST5Q8IZT8 346 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 GCSAMQ8N6F7 178 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 CSNK2A3Q8NEV1 391 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 OTOSQ8NHW6 89 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 ZNF48Q96MX3 618 aaPredicted RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 AMELYQ99218 206 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 PAPOLGQ9BWT3 736 aaKnown RBP10.73□□□□□ -0.69
CHD3-206ENST00000452447 RGCCQ9H4X1 137 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 KIF17Q9P2E2 1029 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 DNAJB9Q9UBS3 223 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
CHD3-206ENST00000452447 TRRAPQ9Y4A5 3859 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 hCG_38984A0A1B0GV85 526 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 ANXA2P2A6NMY6 339 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 C22orf46C9J442 243 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 SELENOFO60613 162 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 TIPRLO75663 272 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 GYPAP02724 150 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 GSK3AP49840 483 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 CDK5Q00535 292 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 AWAT1Q58HT5 328 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 GPR157Q5UAW9 335 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 C9orf139Q6ZV77 190 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 CPOQ8IVL8 374 aa10.72□□□□□ -0.69
CHD3-206ENST00000452447 PNLDC1Q8NA58 520 aaKnown RBP10.72□□□□□ -0.69
CHD3-206ENST00000452447 RAB3IPQ96QF0 476 aaPredicted RBP10.72□□□□□ -0.69
CHD3-206ENST00000452447 PCGF1Q9BSM1 259 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms