RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 GNGT2O14610 69 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 GYG2O15488 501 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 PRODHO43272 600 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 TBX1O43435 398 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 SELENOFO60613 162 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 FKBP6O75344 327 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 E2F6O75461 281 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 PLATP00750 562 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 APOC1P02654 83 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 PRR23D2P0DMB1 279 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 PAICSP22234 425 aaKnown RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 POU1F1P28069 291 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 TIGD6Q17RP2 521 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 SFRP4Q6FHJ7 346 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 ZNF826PQ6ZT77 177 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 WDR86Q86TI4 376 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 SPATA24Q86W54 205 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 PARP8Q8N3A8 854 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 GCSAMQ8N6F7 178 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 OR52H1Q8NGJ2 320 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 OTOSQ8NHW6 89 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 BCAS4Q8TDM0 211 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 GCDHQ92947 438 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 REEP6Q96HR9 211 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 NUDT16L1Q9BRJ7 211 aaKnown RBP10.38□□□□□ -0.75
CPSF4-208ENST00000452047 C1orf123Q9NWV4 160 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 DNAJC27Q9NZQ0 273 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 POMPQ9Y244 141 aa10.38□□□□□ -0.75
CPSF4-208ENST00000452047 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-208ENST00000452047 OOEPA6NGQ2 149 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 ANKRD30BLA7E2S9 258 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 C3orf80F5H4A9 247 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 FCN3O75636 299 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 LHBP01229 141 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 HMGN1P05114 100 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 GRPP07492 148 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 LYNP07948 512 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 ANXA8P13928 327 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 PRKACGP22612 351 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 SLC2A5P22732 501 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 PRTN3P24158 256 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 GSK3AP49840 483 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 NPY4RP50391 375 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 OR8B8Q15620 311 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 KCNJ8Q15842 424 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 RBMS3Q6XE24 437 aaKnown RBP10.37□□□□□ -0.75
CPSF4-208ENST00000452047 FAM57BQ71RH2 274 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 FAM90A1Q86YD7 464 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 CPOQ8IVL8 374 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 C11orf53Q8IXP5 236 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 BBS1Q8NFJ9 593 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 MMADHCQ9H3L0 296 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-208ENST00000452047 PPP1R3EQ9H7J1 279 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 YY1AP1Q9H869 796 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 SP140LQ9H930 580 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 ZNF556Q9HAH1 456 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 SLC25A19Q9HC21 320 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 SMURF1Q9HCE7 757 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 TRIM36Q9NQ86 728 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 C14orf119Q9NWQ9 140 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 DNAJB9Q9UBS3 223 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 KLHDC2Q9Y2U9 406 aa10.37□□□□□ -0.75
CPSF4-208ENST00000452047 IGHV3OR16-10A0A075B7F0 116 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 TRAV38-1A0A0B4J264 116 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 A6NLC8 198 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 DNAJC8O75937 253 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 H2BFMP0C1H6 154 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 EGR1P18146 543 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 CFL1P23528 166 aaKnown RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 NAA10P41227 235 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 MZT1Q08AG7 82 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 ZSCAN26Q16670 478 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 AWAT1Q58HT5 328 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 SLC35D3Q5M8T2 416 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 TEX36Q5VZQ5 186 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 TMEM236Q5W0B7 351 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 ZNF454Q8N9F8 522 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 BOLLQ8N9W6 283 aaKnown RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 ITPKCQ96DU7 683 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 TECTBQ96PL2 329 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 MS4A7Q9GZW8 240 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 OR10A2Q9H208 303 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 RGCCQ9H4X1 137 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 BRD7Q9NPI1 651 aa10.36□□□□□ -0.75
CPSF4-208ENST00000452047 SOX21Q9Y651 276 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-208ENST00000452047 TRRAPQ9Y4A5 3859 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 hCG_1807616A0A1W2PRN6 198 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 ERICH4A6NGS2 130 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-208ENST00000452047 CLDN34H7C241 214 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 ADAM20O43506 726 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 NDUFA2O43678 99 aa10.35□□□□□ -0.75
CPSF4-208ENST00000452047 GYPAP02724 150 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms