RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 OR8S1Q8NH09 359 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 RAB40AQ8WXH6 277 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 GCDHQ92947 438 aaPredicted RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 DACT3Q96B18 629 aaPredicted RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 SGK3Q96BR1 496 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 TECTBQ96PL2 329 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 DUX5Q96PT3 197 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 FAM53CQ9NYF3 392 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 ZNF319Q9P2F9 582 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 hCG_38984A0A1B0GV85 526 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 hCG_1807616A0A1W2PRN6 198 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 TCRBV3S1A0A5B6 114 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 ANKRD30BLA7E2S9 258 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 LGALS8O00214 317 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 DNAJC8O75937 253 aaPredicted RBP15.33■□□□□ 0.04
PSPC1-202ENST00000427943 LYNP07948 512 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 PSMB10P40306 273 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 CDK5Q00535 292 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 PRSS45Q7RTY3 260 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 CPOQ8IVL8 374 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 OTOSQ8NHW6 89 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 THEM6Q8WUY1 208 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 PGAM5Q96HS1 289 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 ZNF48Q96MX3 618 aaPredicted RBP15.33■□□□□ 0.04
PSPC1-202ENST00000427943 NUDT16L1Q9BRJ7 211 aaKnown RBP15.33■□□□□ 0.04
PSPC1-202ENST00000427943 MS4A7Q9GZW8 240 aaPredicted RBP15.33■□□□□ 0.04
PSPC1-202ENST00000427943 PPP1R3EQ9H7J1 279 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 YY1AP1Q9H869 796 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 NTN4Q9HB63 628 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 DNAJB9Q9UBS3 223 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 KLHDC2Q9Y2U9 406 aa15.33■□□□□ 0.04
PSPC1-202ENST00000427943 TMEM89A2RUT3 159 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 DNAJC9-AS1A6NH13 148 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 C22orf46C9J442 243 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 PHYHO14832 338 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 PRODHO43272 600 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 APOC1P02654 83 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 ANXA8P13928 327 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 HOXB6P17509 224 aaKnown RBP15.32■□□□□ 0.04
PSPC1-202ENST00000427943 EGR1P18146 543 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 CFPP27918 469 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 DDOSTP39656 456 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 RPS7P62081 194 aaKnown RBP15.32■□□□□ 0.04
PSPC1-202ENST00000427943 TUSC1Q2TAM9 212 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 RBMS3Q6XE24 437 aaKnown RBP15.32■□□□□ 0.04
PSPC1-202ENST00000427943 DOK3Q7L591 496 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 WDR86Q86TI4 376 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 GCSAMQ8N6F7 178 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 SPERTQ8NA61 448 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 PLPP7Q8NBV4 271 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 UPRTQ96BW1 309 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 OR10A2Q9H208 303 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 SP140LQ9H930 580 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 SLC25A19Q9HC21 320 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 C14orf119Q9NWQ9 140 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 KIF17Q9P2E2 1029 aa15.32■□□□□ 0.04
PSPC1-202ENST00000427943 SOX21Q9Y651 276 aaPredicted RBP15.32■□□□□ 0.04
PSPC1-202ENST00000427943 KIR2DS1A0A191URI9 304 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 OOEPA6NGQ2 149 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 ADAM20O43506 726 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 TIPRLO75663 272 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 GYPAP02724 150 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 HMGN1P05114 100 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 GSK3AP49840 483 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 CSNK2BP67870 215 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 MZT1Q08AG7 82 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.31■□□□□ 0.04
PSPC1-202ENST00000427943 PAPD5Q8NDF8 572 aaKnown RBP15.31■□□□□ 0.04
PSPC1-202ENST00000427943 OR52H1Q8NGJ2 320 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 C1orf147Q96MC9 270 aaPredicted RBP15.31■□□□□ 0.04
PSPC1-202ENST00000427943 PAPOLGQ9BWT3 736 aaKnown RBP15.31■□□□□ 0.04
PSPC1-202ENST00000427943 SMURF1Q9HCE7 757 aa15.31■□□□□ 0.04
PSPC1-202ENST00000427943 IGHV3OR15-7A0A075B7D8 119 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 PPIAL4GP0DN37 164 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 SLC2A5P22732 501 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 COMPP49747 757 aaPredicted RBP15.3■□□□□ 0.04
PSPC1-202ENST00000427943 FGF12P61328 243 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 POU4F2Q12837 409 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 APOFQ13790 326 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 KCNJ8Q15842 424 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 FAM90A1Q86YD7 464 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 CADM1Q9BY67 442 aaKnown RBP15.3■□□□□ 0.04
PSPC1-202ENST00000427943 RASSF4Q9H2L5 321 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 ERVK-18Q9QC07 812 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 RHBDD3Q9Y3P4 386 aa15.3■□□□□ 0.04
PSPC1-202ENST00000427943 TRAV38-1A0A0B4J264 116 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 MDFIC2A0A1B0GVS7 189 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 ENSAO43768 121 aaKnown RBP15.29■□□□□ 0.04
PSPC1-202ENST00000427943 PLATP00750 562 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 MRPL3P09001 348 aaKnown RBP15.29■□□□□ 0.04
PSPC1-202ENST00000427943 CFL1P23528 166 aaKnown RBP15.29■□□□□ 0.04
PSPC1-202ENST00000427943 GNALP38405 381 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 NPY4RP50391 375 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 HCCSP53701 268 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 BAMBIQ13145 260 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 SLC35D3Q5M8T2 416 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 RHOUQ7L0Q8 258 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 ZNF454Q8N9F8 522 aa15.29■□□□□ 0.04
PSPC1-202ENST00000427943 OR1M1Q8NGA1 313 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms